RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 PJA1Q8NG27 643 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 TTC8Q8TAM2 541 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 IRGQQ8WZA9 623 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 NDRG1Q92597 394 aaKnown RBP11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 CLDN23Q96B33 292 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 MSANTD3Q96H12 275 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 CDK5RAP1Q96SZ6 601 aaKnown RBP11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 SLC4A5Q9BY07 1137 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 FOXQ1Q9C009 403 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 NACA2Q9H009 215 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 KCNH6Q9H252 994 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 GANQ9H2C0 597 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 ECT2Q9H8V3 914 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 CBX8Q9HC52 389 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 LTB4R2Q9NPC1 389 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 RTN4Q9NQC3 1192 aaKnown RBP11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 DLGAP2Q9P1A6 1054 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 CFAP97Q9P2B7 532 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 TBC1D14Q9P2M4 693 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 NUDT5Q9UKK9 219 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 DAAM1Q9Y4D1 1078 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 ARIH1Q9Y4X5 557 aaPredicted RBP11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 OBSL1O75147 1896 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 NUP210Q8TEM1 1887 aaPredicted RBP11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 YJEFN3A6XGL0 299 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 E7ENQ6 273 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 SPECC1L-ADORA2AF8WAN1 911 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 NCAM2O15394 837 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 GREM1O60565 184 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 FBXO21O94952 628 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 DCNP07585 359 aaKnown RBP11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 PNMA6AP0CW24 399 aaPredicted RBP11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 LCP1P13796 627 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 CTHP32929 405 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 KRT9P35527 623 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 SOX9P48436 509 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 DAOAP59103 153 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 POLR2FP61218 127 aaKnown RBP11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 COG7P83436 770 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 AMPD2Q01433 879 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 ADIGQ0VDE8 80 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 NR1H3Q13133 447 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 UBXN2BQ14CS0 331 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 NFKBIBQ15653 356 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 SIX6OS1Q8N1H7 587 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 ATP2A3Q93084 1043 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 OTUB2Q96DC9 234 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 PRRX2Q99811 253 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 ABCC13Q9NSE7 274 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 FAM207AQ9NSI2 230 aaPredicted RBP11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 CYTH4Q9UIA0 394 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 WNT6Q9Y6F9 365 aa11.7□□□□□ -0.54
SCARNA20-201ENST00000516768 F8VZ95 297 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 PIK3R2O00459 728 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 TRDMT1O14717 391 aaKnown RBP11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 EPHB6O15197 1021 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 TEX33O43247 280 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 CYP11B1P15538 503 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 TARSP26639 723 aaKnown RBP11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 RPS9P46781 194 aaKnown RBP11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 IFNAR2P48551 515 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 GALK1P51570 392 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 NR1I3Q14994 352 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 FILIP1LQ4L180 1135 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 BTBD8Q5XKL5 378 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 RHBDF2Q6PJF5 856 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 TXNDC11Q6PKC3 985 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 LUZP1Q86V48 1076 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 CCDC105Q8IYK2 499 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 CPA6Q8N4T0 437 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 NEK11Q8NG66 645 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 DDX1Q92499 740 aaKnown RBP11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 WBP2Q969T9 261 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 CHFRQ96EP1 664 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 NAP1L5Q96NT1 182 aaPredicted RBP11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 ST7Q9NRC1 585 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 OLA1Q9NTK5 396 aaKnown RBP11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 SH3BP1Q9Y3L3 701 aa11.69□□□□□ -0.54
SCARNA20-201ENST00000516768 A0A1B0GTH6 734 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 MDM4O15151 490 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 GALR2O43603 387 aaPredicted RBP11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 NFATC1O95644 943 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 LTFP02788 710 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 FYNP06241 537 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 CHRNB1P11230 501 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 GJA4P35212 333 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 SOX5P35711 763 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 JAM2P57087 298 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 GOLGA8FQ08AF8 430 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 GOLGA8DPQ0D2H9 430 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 EFEMP1Q12805 493 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 DHCR24Q15392 516 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 RSRC2Q7L4I2 434 aaKnown RBP11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 MIB1Q86YT6 1006 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 DTWD2Q8NBA8 298 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 CLEC4CQ8WTT0 213 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 RNF139Q8WU17 664 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 EDEM1Q92611 657 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 PCMTD1Q96MG8 357 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms