RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 AKR1A1P14550 325 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 HERVK_113P62684 666 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 SLC39A12Q504Y0 691 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 SETMARQ53H47 684 aaPredicted RBP11.35□□□□□ -0.59
TRIM41-209ENST00000515834 IGDCC4Q8TDY8 1250 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 C1QTNF7Q9BXJ2 289 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 ELOVL6Q9H5J4 265 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 IL1RAPL1Q9NZN1 696 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 CDY2AQ9Y6F7 541 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 CDY1Q9Y6F8 540 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 TRPC5OSA6NMA1 111 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 RGS5O15539 181 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 EIF2S1P05198 315 aaKnown RBP11.35□□□□□ -0.59
TRIM41-209ENST00000515834 CLTBP09497 229 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 CSNK2BP67870 215 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 MIIPQ5JXC2 388 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 ZCCHC8Q6NZY4 707 aaKnown RBP11.35□□□□□ -0.59
TRIM41-209ENST00000515834 CYP20A1Q6UW02 462 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 TMEM199Q8N511 208 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 ZSCAN18Q8TBC5 510 aaPredicted RBP11.35□□□□□ -0.59
TRIM41-209ENST00000515834 OXCT2Q9BYC2 517 aaPredicted RBP11.35□□□□□ -0.59
TRIM41-209ENST00000515834 NEUROD4Q9HD90 331 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 ZNF711Q9Y462 761 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 PCDHB9Q9Y5E1 797 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 TK2O00142 265 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 NKRFO15226 690 aaKnown RBP eCLIP11.35□□□□□ -0.59
TRIM41-209ENST00000515834 KLHL2O95198 593 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 FLT3P36888 993 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 BOLA3Q53S33 107 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 FBXL19Q6PCT2 694 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 LGI2Q8N0V4 545 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 OR2W6PQ8NHA6 318 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 CMTM5Q96DZ9 223 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 ARMC7Q9H6L4 198 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 ATP13A1Q9HD20 1204 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 OPLAHO14841 1288 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 XPO1O14980 1071 aaKnown RBP11.35□□□□□ -0.59
TRIM41-209ENST00000515834 CYP11B2P19099 503 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 SNRPFP62306 86 aaKnown RBP11.35□□□□□ -0.59
TRIM41-209ENST00000515834 MACC1Q6ZN28 852 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 COLGALT2Q8IYK4 626 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 E2F7Q96AV8 911 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 PLA2G12BQ9BX93 195 aa11.35□□□□□ -0.59
TRIM41-209ENST00000515834 F9P00740 461 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 INSRRP14616 1297 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 NUDT2P50583 147 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 NAB2Q15742 525 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 FSCN1Q16658 493 aaKnown RBP11.34□□□□□ -0.59
TRIM41-209ENST00000515834 ILDR2Q71H61 639 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 MICU2Q8IYU8 434 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 CDK20Q8IZL9 346 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 KCNK16Q96T55 309 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 VPS33BQ9H267 617 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 ACTR8Q9H981 624 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 GPSM3Q9Y4H4 160 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 ABCA8O94911 1581 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 SLC37A4O43826 429 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 IFNA16P05015 189 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 CYP2A7P20853 494 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 GARTP22102 1010 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 FBXO33Q7Z6M2 555 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 GRIN3AQ8TCU5 1115 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 SOCS4Q8WXH5 440 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 BBS4Q96RK4 519 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 RNF19AQ9NV58 838 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 ARHGEF5Q12774 1597 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 TRIM49D1C9J1S8 452 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 ACSL4O60488 711 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 IL1R1P14778 569 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 NFE2Q16621 373 aaPredicted RBP11.34□□□□□ -0.59
TRIM41-209ENST00000515834 KYNUQ16719 465 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 TRPC4APQ8TEL6 797 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 CDCA5Q96FF9 252 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 SYT15Q9BQS2 421 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 CEP41Q9BYV8 373 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 MANSC1Q9H8J5 431 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 MRPL17Q9NRX2 175 aaKnown RBP11.34□□□□□ -0.59
TRIM41-209ENST00000515834 AGPAT3Q9NRZ7 376 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 GALNT8Q9NY28 637 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 ZCCHC11Q5TAX3 1644 aaKnown RBP11.34□□□□□ -0.59
TRIM41-209ENST00000515834 GPR75-ASB3A0A0A6YYF3 556 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 USP27XA6NNY8 438 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 BMP10O95393 424 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 ALBP02768 609 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 C21orf59P57076 290 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 PIK3R5Q8WYR1 880 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 PHACTR1Q9C0D0 580 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.34□□□□□ -0.59
TRIM41-209ENST00000515834 VTI1BQ9UEU0 232 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 AP4E1Q9UPM8 1137 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 KLHL20Q9Y2M5 609 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 MEI4A8MW99 385 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 USP1O94782 785 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 CSF1RP07333 972 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 CNPP09543 421 aaKnown RBP11.34□□□□□ -0.59
TRIM41-209ENST00000515834 FMR1Q06787 632 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRIM41-209ENST00000515834 CSHL1Q14406 222 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 FBXO47Q5MNV8 452 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 C4orf22Q6V702 233 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms