RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 ZNF677Q86XU0 584 aa27.23■■□□□ 1.95
DDR1-279ENST00000515529 ZNF276Q8N554 614 aa27.23■■□□□ 1.95
DDR1-279ENST00000515529 TMEM35BQ8NCS4 154 aa27.23■■□□□ 1.95
DDR1-279ENST00000515529 C1orf131Q8NDD1 294 aaKnown RBP27.23■■□□□ 1.95
DDR1-279ENST00000515529 FLCNQ8NFG4 579 aa27.23■■□□□ 1.95
DDR1-279ENST00000515529 OSCP1Q8WVF1 389 aa27.23■■□□□ 1.95
DDR1-279ENST00000515529 SLC4A5Q9BY07 1137 aa27.23■■□□□ 1.95
DDR1-279ENST00000515529 SYNCQ9H7C4 482 aa27.23■■□□□ 1.95
DDR1-279ENST00000515529 OLA1Q9NTK5 396 aaKnown RBP27.23■■□□□ 1.95
DDR1-279ENST00000515529 STRIP2Q9ULQ0 834 aa27.23■■□□□ 1.95
DDR1-279ENST00000515529 KRBA1A5PL33 1030 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 YJEFN3A6XGL0 299 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 E7ENQ6 273 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 SLC9A3R1O14745 358 aaPredicted RBP27.22■■□□□ 1.95
DDR1-279ENST00000515529 IRF1P10914 325 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 ARID5AQ03989 594 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 EFEMP1Q12805 493 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 BSPRYQ5W0U4 402 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 TPRG1Q6ZUI0 275 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 NOP9Q86U38 636 aaKnown RBP27.22■■□□□ 1.95
DDR1-279ENST00000515529 MIB1Q86YT6 1006 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 RIN3Q8TB24 985 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 EPS8L1Q8TE68 723 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 IPO4Q8TEX9 1081 aaKnown RBP27.22■■□□□ 1.95
DDR1-279ENST00000515529 ATP2A3Q93084 1043 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 PPP1R13BQ96KQ4 1090 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 ABCC13Q9NSE7 274 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 IFNKQ9P0W0 207 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 CYTH4Q9UIA0 394 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 RASAL2Q9UJF2 1139 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 WNT6Q9Y6F9 365 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 PIAS3Q9Y6X2 628 aa27.22■■□□□ 1.95
DDR1-279ENST00000515529 E5RJQ4 531 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 PDGFBP01127 241 aaPredicted RBP27.21■■□□□ 1.95
DDR1-279ENST00000515529 RPL34P49207 117 aaKnown RBP27.21■■□□□ 1.95
DDR1-279ENST00000515529 ITPRIPL2Q3MIP1 535 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 TMEM110Q86TL2 294 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 SCUBE3Q8IX30 993 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 FBXL6Q8N531 539 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 KIAA1958Q8N8K9 716 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 MSANTD4Q8NCY6 345 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 TTC8Q8TAM2 541 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 FAM149B1Q96BN6 582 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 FAM83CQ9BQN1 747 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 LRFN3Q9BTN0 628 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 TRIM62Q9BVG3 475 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 EBF3Q9H4W6 596 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 C8orf33Q9H7E9 229 aaPredicted RBP27.21■■□□□ 1.95
DDR1-279ENST00000515529 TBC1D17Q9HA65 648 aa27.21■■□□□ 1.95
DDR1-279ENST00000515529 LSM7Q9UK45 103 aaKnown RBP27.21■■□□□ 1.95
DDR1-279ENST00000515529 HELZP42694 1942 aaKnown RBP27.21■■□□□ 1.95
DDR1-279ENST00000515529 E2F8A0AVK6 867 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 ARNTLO00327 626 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 MDM4O15151 490 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 CBFA2T2O43439 604 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 GABBR2O75899 941 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 LSM8O95777 96 aaKnown RBP27.2■■□□□ 1.94
DDR1-279ENST00000515529 LTFP02788 710 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 ZXDBP98169 803 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 TNK2Q07912 1038 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 RUNX3Q13761 415 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 TRIM68Q6AZZ1 485 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 BHLHA9Q7RTU4 235 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 CPA6Q8N4T0 437 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 CLEC4CQ8WTT0 213 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 EDEM1Q92611 657 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 NUP58Q9BVL2 599 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 KLF16Q9BXK1 252 aaPredicted RBP27.2■■□□□ 1.94
DDR1-279ENST00000515529 GTSE1Q9NYZ3 720 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 MARCH2Q9P0N8 246 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 TBC1D14Q9P2M4 693 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 MYO6Q9UM54 1294 aa27.2■■□□□ 1.94
DDR1-279ENST00000515529 MRPS17Q9Y2R5 130 aaKnown RBP27.2■■□□□ 1.94
DDR1-279ENST00000515529 MAN2B1O00754 1011 aa27.19■■□□□ 1.94
DDR1-279ENST00000515529 MMEP08473 750 aa27.19■■□□□ 1.94
DDR1-279ENST00000515529 GLULP15104 373 aa27.19■■□□□ 1.94
DDR1-279ENST00000515529 FERP16591 822 aa27.19■■□□□ 1.94
DDR1-279ENST00000515529 COG7P83436 770 aa27.19■■□□□ 1.94
DDR1-279ENST00000515529 CDR2Q01850 454 aa27.19■■□□□ 1.94
DDR1-279ENST00000515529 NR1H3Q13133 447 aa27.19■■□□□ 1.94
DDR1-279ENST00000515529 ZNF852Q6ZMS4 543 aa27.19■■□□□ 1.94
DDR1-279ENST00000515529 WDTC1Q8N5D0 677 aa27.19■■□□□ 1.94
DDR1-279ENST00000515529 DDX1Q92499 740 aaKnown RBP27.19■■□□□ 1.94
DDR1-279ENST00000515529 MSANTD3Q96H12 275 aa27.19■■□□□ 1.94
DDR1-279ENST00000515529 ZFRQ96KR1 1074 aaKnown RBP27.19■■□□□ 1.94
DDR1-279ENST00000515529 CPXM1Q96SM3 734 aa27.19■■□□□ 1.94
DDR1-279ENST00000515529 NFATC1O95644 943 aa27.18■■□□□ 1.94
DDR1-279ENST00000515529 ARSAP15289 507 aa27.18■■□□□ 1.94
DDR1-279ENST00000515529 STARD6P59095 220 aa27.18■■□□□ 1.94
DDR1-279ENST00000515529 AMPD2Q01433 879 aa27.18■■□□□ 1.94
DDR1-279ENST00000515529 IER5LQ5T953 404 aa27.18■■□□□ 1.94
DDR1-279ENST00000515529 C1orf228Q6PIY5 440 aa27.18■■□□□ 1.94
DDR1-279ENST00000515529 SLC20A1Q8WUM9 679 aa27.18■■□□□ 1.94
DDR1-279ENST00000515529 NOCTQ9UK39 431 aaKnown RBP27.18■■□□□ 1.94
DDR1-279ENST00000515529 SLC12A8A0AV02 714 aa27.17■■□□□ 1.94
DDR1-279ENST00000515529 CAPN9O14815 690 aa27.17■■□□□ 1.94
DDR1-279ENST00000515529 SCAMP3O14828 347 aaKnown RBP27.17■■□□□ 1.94
DDR1-279ENST00000515529 MLLT6P55198 1093 aaPredicted RBP27.17■■□□□ 1.94
DDR1-279ENST00000515529 UBXN2BQ14CS0 331 aa27.17■■□□□ 1.94
DDR1-279ENST00000515529 OR6B2Q6IFH4 312 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms