RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 NTHL1P78549 312 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 TAF5Q15542 800 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 SLC5A9Q2M3M2 681 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 HFE2Q6ZVN8 426 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 PHLDB2Q86SQ0 1253 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 SHKBP1Q8TBC3 707 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 MRPS31Q92665 395 aaKnown RBP21.98■■□□□ 1.11
LSM6-207ENST00000515311 HLA-CQ95604 372 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 FAM149B1Q96BN6 582 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 SLC2A13Q96QE2 648 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 CDK5RAP1Q96SZ6 601 aaKnown RBP21.98■■□□□ 1.11
LSM6-207ENST00000515311 SELENOOQ9BVL4 669 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 METTL5Q9NRN9 209 aaKnown RBP21.98■■□□□ 1.11
LSM6-207ENST00000515311 OSER1Q9NX31 292 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 ZMYM5Q9UJ78 669 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 CLUHO75153 1309 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 A0A1W2PRU2 124 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 DAB1O75553 588 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 FYNP06241 537 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 CCDC175P0C221 793 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 RALAP11233 206 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 PFKLP17858 780 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 DDX6P26196 483 aaKnown RBP eCLIP21.97■■□□□ 1.11
LSM6-207ENST00000515311 TCEAL1Q15170 157 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 BTBD8Q5XKL5 378 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 MAFAQ8NHW3 353 aaPredicted RBP21.97■■□□□ 1.11
LSM6-207ENST00000515311 PPM1EQ8WY54 764 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 ARHGEF26Q96DR7 871 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 NECTIN4Q96NY8 510 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 ATXN3LQ9H3M9 355 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.97■■□□□ 1.11
LSM6-207ENST00000515311 UVRAGQ9P2Y5 699 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 MYO1AQ9UBC5 1043 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 COG5Q9UP83 839 aa21.97■■□□□ 1.11
LSM6-207ENST00000515311 MRPS23Q9Y3D9 190 aaKnown RBP21.97■■□□□ 1.11
LSM6-207ENST00000515311 PJA2O43164 708 aa21.96■■□□□ 1.11
LSM6-207ENST00000515311 MOSPD3O75425 235 aa21.96■■□□□ 1.11
LSM6-207ENST00000515311 KCNA5P22460 613 aa21.96■■□□□ 1.11
LSM6-207ENST00000515311 FSHRP23945 695 aa21.96■■□□□ 1.11
LSM6-207ENST00000515311 ARHGAP15Q53QZ3 475 aa21.96■■□□□ 1.11
LSM6-207ENST00000515311 HECTD3Q5T447 861 aa21.96■■□□□ 1.11
LSM6-207ENST00000515311 KLHDC10Q6PID8 442 aa21.96■■□□□ 1.11
LSM6-207ENST00000515311 KIAA1328Q86T90 577 aa21.96■■□□□ 1.11
LSM6-207ENST00000515311 TADA2BQ86TJ2 420 aa21.96■■□□□ 1.11
LSM6-207ENST00000515311 RHOT2Q8IXI1 618 aa21.96■■□□□ 1.11
LSM6-207ENST00000515311 RFFLQ8WZ73 363 aa21.96■■□□□ 1.11
LSM6-207ENST00000515311 SUSD6Q92537 303 aa21.96■■□□□ 1.11
LSM6-207ENST00000515311 TCEAL4Q96EI5 215 aa21.96■■□□□ 1.11
LSM6-207ENST00000515311 OLA1Q9NTK5 396 aaKnown RBP21.96■■□□□ 1.11
LSM6-207ENST00000515311 EYSQ5T1H1 3165 aa21.95■■□□□ 1.11
LSM6-207ENST00000515311 A0A0A6YYK5 440 aaPredicted RBP21.95■■□□□ 1.1
LSM6-207ENST00000515311 H3BQ06 376 aaPredicted RBP21.95■■□□□ 1.1
LSM6-207ENST00000515311 CAPN9O14815 690 aa21.95■■□□□ 1.1
LSM6-207ENST00000515311 TLR5O60602 858 aa21.95■■□□□ 1.1
LSM6-207ENST00000515311 GRAP2O75791 330 aa21.95■■□□□ 1.1
LSM6-207ENST00000515311 ABL1P00519 1130 aa21.95■■□□□ 1.1
LSM6-207ENST00000515311 OAS1P00973 400 aaKnown RBP21.95■■□□□ 1.1
LSM6-207ENST00000515311 RARGP13631 454 aa21.95■■□□□ 1.1
LSM6-207ENST00000515311 RFC1P35251 1148 aaPredicted RBP21.95■■□□□ 1.1
LSM6-207ENST00000515311 MATKP42679 507 aa21.95■■□□□ 1.1
LSM6-207ENST00000515311 SMAD4Q13485 552 aaKnown RBP21.95■■□□□ 1.1
LSM6-207ENST00000515311 CLUL1Q15846 466 aa21.95■■□□□ 1.1
LSM6-207ENST00000515311 MSANTD2Q6P1R3 559 aa21.95■■□□□ 1.1
LSM6-207ENST00000515311 DCUN1D2Q6PH85 259 aa21.95■■□□□ 1.1
LSM6-207ENST00000515311 EDEM1Q92611 657 aa21.95■■□□□ 1.1
LSM6-207ENST00000515311 MCEEQ96PE7 176 aa21.95■■□□□ 1.1
LSM6-207ENST00000515311 NUP85Q9BW27 656 aa21.95■■□□□ 1.1
LSM6-207ENST00000515311 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.95■■□□□ 1.1
LSM6-207ENST00000515311 CDH22Q9UJ99 828 aa21.95■■□□□ 1.1
LSM6-207ENST00000515311 USP15Q9Y4E8 981 aaPredicted RBP21.95■■□□□ 1.1
LSM6-207ENST00000515311 HELZP42694 1942 aaKnown RBP21.94■■□□□ 1.1
LSM6-207ENST00000515311 RCCD1A6NED2 376 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 TMEM191CA6NGB0 347 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 C2CD4BA6NLJ0 364 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 BTNL10A8MVZ5 291 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 NRG2O14511 850 aaPredicted RBP21.94■■□□□ 1.1
LSM6-207ENST00000515311 MTA2O94776 668 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 GJB6O95452 261 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 OLFM2O95897 454 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 NCAM1P13591 858 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 NOS2P35228 1153 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 FLT3P36888 993 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 RNASE9P60153 205 aaKnown RBP21.94■■□□□ 1.1
LSM6-207ENST00000515311 CYP4F8P98187 520 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 CBX2Q14781 532 aaPredicted RBP21.94■■□□□ 1.1
LSM6-207ENST00000515311 TEAD2Q15562 447 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 HS1BP3Q53T59 392 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 DEFB106AQ8N104 65 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 JOSD2Q8TAC2 188 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 ITFG1Q8TB96 612 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 RNF139Q8WU17 664 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 CCSER2Q9H7U1 834 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 RRN3Q9NYV6 651 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 CTTNBP2NLQ9P2B4 639 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 NAALADL1Q9UQQ1 740 aa21.94■■□□□ 1.1
LSM6-207ENST00000515311 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.94■■□□□ 1.1
LSM6-207ENST00000515311 NUP210Q8TEM1 1887 aaPredicted RBP21.94■■□□□ 1.1
LSM6-207ENST00000515311 C2orf78A6NCI8 922 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 GJA1P17302 382 aa21.93■■□□□ 1.1
LSM6-207ENST00000515311 CEBPBP17676 345 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms