RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 PLOD1Q02809 727 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-205ENST00000514271 MGAT3Q09327 533 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 NR1H3Q13133 447 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 FAM187BQ17R55 369 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 IRAK1BP1Q5VVH5 260 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 GDF6Q6KF10 455 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-205ENST00000514271 DUS1LQ6P1R4 473 aaKnown RBP7.73□□□□□ -1.17
CLIP1-205ENST00000514271 FBXL19Q6PCT2 694 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 HACE1Q8IYU2 909 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 GLIS1Q8NBF1 620 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 SHKBP1Q8TBC3 707 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 ADAMTS16Q8TE57 1224 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 DNAJC9Q8WXX5 260 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 KLHL29Q96CT2 875 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 DTNBP1Q96EV8 351 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 ZNF778Q96MU6 729 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 GCOM2Q9BZD3 368 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-205ENST00000514271 NSRP1Q9H0G5 558 aaKnown RBP7.73□□□□□ -1.17
CLIP1-205ENST00000514271 VPS11Q9H270 941 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 PLK2Q9NYY3 685 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 SLC24A2Q9UI40 661 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 DDX39AO00148 427 aaKnown RBP7.73□□□□□ -1.17
CLIP1-205ENST00000514271 ATMINO43313 823 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-205ENST00000514271 UPP2O95045 317 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 ASLP04424 464 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 ARSEP51690 589 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 PLTPP55058 493 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 PFKPQ01813 784 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 XKR9Q5GH70 373 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 LRRC74BQ6ZQY2 392 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 ACAD11Q709F0 780 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 ZBTB8OSQ8IWT0 167 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 NAT8LQ8N9F0 302 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 DIS3LQ8TF46 1054 aaKnown RBP7.73□□□□□ -1.17
CLIP1-205ENST00000514271 DPF3Q92784 378 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 NKD2Q969F2 451 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-205ENST00000514271 LENG1Q96BZ8 264 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-205ENST00000514271 CEP170P1Q96L14 293 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 SLC9A7Q96T83 725 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 RNPEPQ9H4A4 650 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 TMEM134Q9H6X4 195 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 ELAC1Q9H777 363 aaKnown RBP7.73□□□□□ -1.17
CLIP1-205ENST00000514271 SLCO1B3Q9NPD5 702 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 SIRPGQ9P1W8 387 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 DNAJC12Q9UKB3 198 aa7.73□□□□□ -1.17
CLIP1-205ENST00000514271 GOLGA6L10A0A0M3HER8 536 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 STIP1P31948 543 aaKnown RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 CDH5P33151 784 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 RPA3P35244 121 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 NAMPTP43490 491 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 RARRES1P49788 294 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 GTF2BQ00403 316 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 KLC1Q07866 573 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 EMC2Q15006 297 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 OGFRL1Q5TC84 451 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 NET1Q7Z628 596 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 CCDC65Q8IXS2 484 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 MARVELD2Q8N4S9 558 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 ALLCQ8N6M5 410 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 RFWD2Q8NHY2 731 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 SLC35B2Q8TB61 432 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 HERVK_113Q902F9 699 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 SEMA4DQ92854 862 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 RTP4Q96DX8 246 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 MFSD14AQ96MC6 490 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 TTC25Q96NG3 672 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 SAMD11Q96NU1 681 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 PKD2L1Q9P0L9 805 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 PDP2Q9P2J9 529 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 STRIP2Q9ULQ0 834 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 COMMD3-BMI1R4GMX3 469 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 ANKRD36A6QL64 1941 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 SRCAPQ6ZRS2 3230 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 CHMP2AO43633 222 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 LDHAP00338 332 aaKnown RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 S100BP04271 92 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 SSBP05455 408 aaKnown RBP eCLIP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 ATF7P17544 494 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 AOC1P19801 751 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 PSMD8P48556 350 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 ITGA8P53708 1063 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 GPC5P78333 572 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 BFSP1Q12934 665 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 ZNF211Q13398 564 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 BCL2A1Q16548 175 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 PLEKHA7Q6IQ23 1121 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 SLC39A4Q6P5W5 647 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 POTEGQ6S5H5 508 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 JAZF1Q86VZ6 243 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 TPH2Q8IWU9 490 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 C7orf61Q8IZ16 206 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 ZNF75CPQ92670 426 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 PBXIP1Q96AQ6 731 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 AGAP3Q96P47 875 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 TUBGCP5Q96RT8 1024 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 ZHX3Q9H4I2 956 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 PCDH12Q9NPG4 1184 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 METTL5Q9NRN9 209 aaKnown RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 IL1RAPL1Q9NZN1 696 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 TBC1D7Q9P0N9 293 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms