RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 RIPOR3Q96MK2 946 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 PHOX2BQ99453 314 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 CORO1BQ9BR76 489 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 C11orf70Q9BRQ4 267 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 SELENOOQ9BVL4 669 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 TTLL2Q9BWV7 592 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 APOL5Q9BWW9 433 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 ULBP1Q9BZM6 244 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 TSGA10Q9BZW7 698 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 ADAM7Q9H2U9 754 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 ASNSD1Q9NWL6 643 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 TAS2R14Q9NYV8 317 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 CHORDC1Q9UHD1 332 aaPredicted RBP10.65□□□□□ -0.7
NEDD9-214ENST00000513989 LCMT1Q9UIC8 334 aa10.65□□□□□ -0.7
NEDD9-214ENST00000513989 SIGLEC16A6NMB1 481 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 SOBPA7XYQ1 873 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 PIK3R2O00459 728 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 PAPSS1O43252 624 aaPredicted RBP10.64□□□□□ -0.71
NEDD9-214ENST00000513989 ZSCAN12O43309 604 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 HSF2BPO75031 334 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 ERBB2P04626 1255 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 CCDC175P0C221 793 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 TMEM253P0C7T8 217 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 MYL4P12829 197 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 HMGA1P17096 107 aaKnown RBP10.64□□□□□ -0.71
NEDD9-214ENST00000513989 ABCB4P21439 1286 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 DDX6P26196 483 aaKnown RBP eCLIP10.64□□□□□ -0.711e-23■□□□□ 8.8
NEDD9-214ENST00000513989 MTHFRP42898 656 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 NAP1L1P55209 391 aaKnown RBP10.64□□□□□ -0.71
NEDD9-214ENST00000513989 YWHAGP61981 247 aaKnown RBP eCLIP10.64□□□□□ -0.71
NEDD9-214ENST00000513989 YWHAZP63104 245 aaKnown RBP10.64□□□□□ -0.71
NEDD9-214ENST00000513989 KIF5AQ12840 1032 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 MTMR3Q13615 1198 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 IFI16Q16666 785 aaKnown RBP10.64□□□□□ -0.71
NEDD9-214ENST00000513989 PTPN20Q4JDL3 420 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 FAM102AQ5T9C2 384 aaPredicted RBP10.64□□□□□ -0.71
NEDD9-214ENST00000513989 RAD9BQ6WBX8 426 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 MON1BQ7L1V2 547 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 BEND5Q7L4P6 421 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 ARCQ7LC44 396 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 GPR149Q86SP6 731 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 XYLT1Q86Y38 959 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 TMEM139Q8IV31 216 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 C12orf76Q8N812 135 aaPredicted RBP10.64□□□□□ -0.71
NEDD9-214ENST00000513989 C3orf20Q8ND61 904 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 RNF139Q8WU17 664 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 MRPS31Q92665 395 aaKnown RBP10.64□□□□□ -0.71
NEDD9-214ENST00000513989 FAM149B1Q96BN6 582 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 ZNF653Q96CK0 615 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 MCRS1Q96EZ8 462 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 NACA2Q9H009 215 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 KCNH6Q9H252 994 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 ATXN3LQ9H3M9 355 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 POPDC2Q9HBU9 364 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 AVENQ9NQS1 362 aaPredicted RBP10.64□□□□□ -0.71
NEDD9-214ENST00000513989 ABCC13Q9NSE7 274 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 TMEM30AQ9NV96 361 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 RRN3Q9NYV6 651 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 CLIC5Q9NZA1 410 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 UVRAGQ9P2Y5 699 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 MYO1AQ9UBC5 1043 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 CNOT8Q9UFF9 292 aaKnown RBP10.64□□□□□ -0.71
NEDD9-214ENST00000513989 CYTH4Q9UIA0 394 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 VWA8A3KMH1 1905 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 GVINP1Q7Z2Y8 2422 aa10.64□□□□□ -0.71
NEDD9-214ENST00000513989 NCANO14594 1321 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 FAM92AA1XBS5 289 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 GOLGA8SH3BPF8 625 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 PAPLNO95428 1278 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 LTFP02788 710 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 CYP1A2P05177 515 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 RHOP08100 348 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 PFKLP17858 780 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 GABRR2P28476 465 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 GBP1P32455 592 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 NOP2P46087 812 aaKnown RBP10.63□□□□□ -0.71
NEDD9-214ENST00000513989 GSCP56915 257 aaPredicted RBP10.63□□□□□ -0.71
NEDD9-214ENST00000513989 DAOAP59103 153 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 RNASE9P60153 205 aaKnown RBP10.63□□□□□ -0.71
NEDD9-214ENST00000513989 CCZ1BP86790 482 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 CCZ1P86791 482 aaPredicted RBP10.63□□□□□ -0.71
NEDD9-214ENST00000513989 HECTD3Q5T447 861 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 SNX30Q5VWJ9 437 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 BSPRYQ5W0U4 402 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 FAM183BPQ6ZVS7 135 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 RSRC2Q7L4I2 434 aaKnown RBP10.63□□□□□ -0.71
NEDD9-214ENST00000513989 GPRIN1Q7Z2K8 1008 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 GRASPQ7Z6J2 395 aaPredicted RBP10.63□□□□□ -0.71
NEDD9-214ENST00000513989 RHOT2Q8IXI1 618 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 ZNF830Q96NB3 372 aaPredicted RBP10.63□□□□□ -0.71
NEDD9-214ENST00000513989 NECTIN4Q96NY8 510 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 NCAPGQ9BPX3 1015 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 OLA1Q9NTK5 396 aaKnown RBP10.63□□□□□ -0.71
NEDD9-214ENST00000513989 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.63□□□□□ -0.71
NEDD9-214ENST00000513989 CTTNBP2NLQ9P2B4 639 aa10.63□□□□□ -0.71
NEDD9-214ENST00000513989 DNMT3BQ9UBC3 853 aaKnown RBP10.63□□□□□ -0.71
NEDD9-214ENST00000513989 MRPS23Q9Y3D9 190 aaKnown RBP10.63□□□□□ -0.71
NEDD9-214ENST00000513989 PTPRZ1P23471 2315 aaPredicted RBP10.63□□□□□ -0.71
NEDD9-214ENST00000513989 DCHS1Q96JQ0 3298 aa10.62□□□□□ -0.71
NEDD9-214ENST00000513989 CLUHO75153 1309 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms