RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 ETFBKMTQ8IXQ9 262 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 C4orf19Q8IY42 314 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 KIAA1958Q8N8K9 716 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 FSIP1Q8NA03 581 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 GALNT11Q8NCW6 608 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 NCOA7Q8NI08 942 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 C9orf43Q8TAL5 461 aaPredicted RBP8.18□□□□□ -1.1
CLDND1-229ENST00000513988 SPPL2BQ8TCT7 592 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 C2orf15Q8WU43 125 aaKnown RBP8.18□□□□□ -1.1
CLDND1-229ENST00000513988 SCFD1Q8WVM8 642 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 HTR3CQ8WXA8 447 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 PRCCQ92733 491 aaPredicted RBP8.18□□□□□ -1.1
CLDND1-229ENST00000513988 PRR11Q96HE9 360 aaPredicted RBP8.18□□□□□ -1.1
CLDND1-229ENST00000513988 LXNQ9BS40 222 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 MKRN2Q9H000 416 aaKnown RBP8.18□□□□□ -1.1
CLDND1-229ENST00000513988 ABCG4Q9H172 646 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 POLR3FQ9H1D9 316 aaPredicted RBP8.18□□□□□ -1.1
CLDND1-229ENST00000513988 ZNF71Q9NQZ8 489 aaPredicted RBP8.18□□□□□ -1.1
CLDND1-229ENST00000513988 GDF3Q9NR23 364 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 ABI2Q9NYB9 513 aaPredicted RBP8.18□□□□□ -1.1
CLDND1-229ENST00000513988 CNTNAP5Q8WYK1 1306 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 TACC2O95359 2948 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 EML1O00423 815 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 ZBTB39O15060 712 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 TYMPP19971 482 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 SDSP20132 328 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 BCAT1P54687 386 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 MLLT10P55197 1068 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 ANTXR2P58335 489 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 OSTNP61366 133 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 RACK1P63244 317 aaKnown RBP8.17□□□□□ -1.1
CLDND1-229ENST00000513988 SRSF11Q05519 484 aaKnown RBP8.17□□□□□ -1.1
CLDND1-229ENST00000513988 BNIP3Q12983 259 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 MANEAQ5SRI9 462 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 PPP1R26Q5T8A7 1209 aaPredicted RBP8.17□□□□□ -1.1
CLDND1-229ENST00000513988 CDCA2Q69YH5 1023 aaPredicted RBP8.17□□□□□ -1.1
CLDND1-229ENST00000513988 GRAMD4Q6IC98 578 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 SV2AQ7L0J3 742 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 C14orf80Q86SX3 495 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 CACUL1Q86Y37 369 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 TMPRSS6Q8IU80 811 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 OR10T2Q8NGX3 314 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 RILPL2Q969X0 211 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 BIRC7Q96CA5 298 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 GRAMD1AQ96CP6 724 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 ATXN7L3BQ96GX2 97 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 NACC1Q96RE7 527 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 SLC6A16Q9GZN6 736 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 OSBPL2Q9H1P3 480 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 C2orf40Q9H1Z8 148 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 SLKQ9H2G2 1235 aaPredicted RBP8.17□□□□□ -1.1
CLDND1-229ENST00000513988 TTC12Q9H892 705 aaPredicted RBP8.17□□□□□ -1.1
CLDND1-229ENST00000513988 CASS4Q9NQ75 786 aa8.17□□□□□ -1.1
CLDND1-229ENST00000513988 ARHGAP10A1A4S6 786 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 PMS2P1A4D2B8 440 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 WASH3PC4AMC7 463 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 ACKR2O00590 384 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 ADAMTS3O15072 1205 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 TRIM24O15164 1050 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 SIGLEC6O43699 453 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 NOBOXO60393 691 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 DGAT1O75907 488 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 FN1P02751 2386 aaKnown RBP8.16□□□□□ -1.1
CLDND1-229ENST00000513988 ITGA2BP08514 1039 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 GRM5P41594 1212 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 GPR15P49685 360 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 ZXDBP98169 803 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 HS1BP3Q53T59 392 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 ATF7IP2Q5U623 682 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 SDHAF4Q5VUM1 108 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 CASC1Q6TDU7 716 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 DHX32Q7L7V1 743 aaKnown RBP8.16□□□□□ -1.1
CLDND1-229ENST00000513988 TIPARPQ7Z3E1 657 aaKnown RBP8.16□□□□□ -1.1
CLDND1-229ENST00000513988 TMTC2Q8N394 836 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 CEP120Q8N960 986 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 FANCBQ8NB91 859 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 TRMT2BQ96GJ1 504 aaKnown RBP8.16□□□□□ -1.1
CLDND1-229ENST00000513988 CCDC43Q96MW1 224 aaKnown RBP8.16□□□□□ -1.1
CLDND1-229ENST00000513988 ZCWPW1Q9H0M4 648 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 DIAPH3Q9NSV4 1193 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 SEPT10Q9P0V9 454 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 TUBGCP4Q9UGJ1 667 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 PHTF1Q9UMS5 762 aa8.16□□□□□ -1.1
CLDND1-229ENST00000513988 PRRC2CQ9Y520 2896 aaKnown RBP8.16□□□□□ -1.1
CLDND1-229ENST00000513988 KIF26BQ2KJY2 2108 aa8.15□□□□□ -1.1
CLDND1-229ENST00000513988 ANAPC1Q9H1A4 1944 aa8.15□□□□□ -1.1
CLDND1-229ENST00000513988 ATRQ13535 2644 aa8.15□□□□□ -1.1
CLDND1-229ENST00000513988 A0A1B0GVM2 712 aa8.15□□□□□ -1.1
CLDND1-229ENST00000513988 HIP1O00291 1037 aa8.15□□□□□ -1.1
CLDND1-229ENST00000513988 HOXC11O43248 304 aaPredicted RBP8.15□□□□□ -1.1
CLDND1-229ENST00000513988 TSPAN3O60637 253 aa8.15□□□□□ -1.1
CLDND1-229ENST00000513988 PRPF40AO75400 957 aaKnown RBP8.15□□□□□ -1.1
CLDND1-229ENST00000513988 NOL4O94818 638 aa8.15□□□□□ -1.1
CLDND1-229ENST00000513988 SEMA4FO95754 770 aa8.15□□□□□ -1.1
CLDND1-229ENST00000513988 EDN1P05305 212 aa8.15□□□□□ -1.1
CLDND1-229ENST00000513988 ODC1P11926 461 aa8.15□□□□□ -1.1
CLDND1-229ENST00000513988 ACSL1P33121 698 aa8.15□□□□□ -1.1
CLDND1-229ENST00000513988 AARSP49588 968 aaKnown RBP eCLIP8.15□□□□□ -1.1
CLDND1-229ENST00000513988 SMARCB1Q12824 385 aa8.15□□□□□ -1.1
CLDND1-229ENST00000513988 KLRB1Q12918 225 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms