RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 INTS6LQ5JSJ4 861 aaKnown RBP15.58■□□□□ 0.08
VCAN-211ENST00000513984 UBAP2Q5T6F2 1119 aaKnown RBP15.58■□□□□ 0.08
VCAN-211ENST00000513984 KDM7AQ6ZMT4 941 aa15.58■□□□□ 0.08
VCAN-211ENST00000513984 CEP128Q6ZU80 1094 aa15.58■□□□□ 0.08
VCAN-211ENST00000513984 CROCCP2Q86T23 111 aa15.58■□□□□ 0.08
VCAN-211ENST00000513984 ZCCHC9Q8N567 271 aaKnown RBP15.58■□□□□ 0.08
VCAN-211ENST00000513984 PQLC3Q8N755 202 aa15.58■□□□□ 0.08
VCAN-211ENST00000513984 FAM149B1Q96BN6 582 aa15.58■□□□□ 0.08
VCAN-211ENST00000513984 PKMYT1Q99640 499 aa15.58■□□□□ 0.08
VCAN-211ENST00000513984 FTHL17Q9BXU8 183 aa15.58■□□□□ 0.08
VCAN-211ENST00000513984 CSNK1G1Q9HCP0 422 aa15.58■□□□□ 0.08
VCAN-211ENST00000513984 TMEM30AQ9NV96 361 aa15.58■□□□□ 0.08
VCAN-211ENST00000513984 TPX2Q9ULW0 747 aaKnown RBP15.58■□□□□ 0.08
VCAN-211ENST00000513984 TET1Q8NFU7 2136 aa15.58■□□□□ 0.08
VCAN-211ENST00000513984 MYO16Q9Y6X6 1858 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 HHLA1C9JL84 531 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 SHOX2O60902 331 aaPredicted RBP15.57■□□□□ 0.08
VCAN-211ENST00000513984 RBP3P10745 1247 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 TYMPP19971 482 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 L1CAMP32004 1257 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 NDUFV1P49821 464 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 CDK7P50613 346 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 ATXN1P54253 815 aaKnown RBP15.57■□□□□ 0.08
VCAN-211ENST00000513984 GDF10P55107 478 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 DSC1Q08554 894 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 MORF4L2Q15014 288 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 CLLU1OSQ5K130 101 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 RNASEH2BQ5TBB1 312 aaKnown RBP15.57■□□□□ 0.08
VCAN-211ENST00000513984 OTUD1Q5VV17 481 aaPredicted RBP15.57■□□□□ 0.08
VCAN-211ENST00000513984 LRRC8DQ7L1W4 858 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 PLD5Q8N7P1 536 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 PCDH19Q8TAB3 1148 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.57■□□□□ 0.08
VCAN-211ENST00000513984 NDRG1Q92597 394 aaKnown RBP15.57■□□□□ 0.08
VCAN-211ENST00000513984 P3H4Q92791 437 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 MYLPFQ96A32 169 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 NPY6RQ99463 290 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 LRRC4CQ9HCJ2 640 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 CNGB3Q9NQW8 809 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 CALCOCO1Q9P1Z2 691 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 AP4E1Q9UPM8 1137 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 SHOC2Q9UQ13 582 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 SCN5AQ14524 2016 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 APOL1O14791 398 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 IFNB1P01574 187 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 ITGB1P05556 798 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 SELPP16109 830 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 NR1D1P20393 614 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 SULT1E1P49888 294 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 CACNA2D1P54289 1103 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 DAOAP59103 153 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 NPNTQ6UXI9 565 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 PSTKQ8IV42 348 aaKnown RBP15.57■□□□□ 0.08
VCAN-211ENST00000513984 HASPINQ8TF76 798 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 RSAD2Q8WXG1 361 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 ULBP1Q9BZM6 244 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 POPDC2Q9HBU9 364 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 MTMR10Q9NXD2 777 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 STAP1Q9ULZ2 295 aa15.57■□□□□ 0.08
VCAN-211ENST00000513984 TTC3P53804 2025 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 TMEM189-UBE2V1I3L0A0 370 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 DNM1LO00429 736 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 B4GALT3O60512 393 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 TTC4O95801 387 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 COL6A1P12109 1028 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 STIP1P31948 543 aaKnown RBP15.56■□□□□ 0.08
VCAN-211ENST00000513984 ROR1Q01973 937 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 DCAF6Q58WW2 860 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 NOMO2Q5JPE7 1267 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 OVOS1Q6IE37 1185 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 GPRIN1Q7Z2K8 1008 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 PCGF5Q86SE9 256 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 UNC45BQ8IWX7 931 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 FAM126BQ8IXS8 530 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 CCDC185Q8N715 623 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 URGCPQ8TCY9 931 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 PGM2Q96G03 612 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 KCNK16Q96T55 309 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 CENPHQ9H3R5 247 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 C10orf88Q9H8K7 445 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 PCDHB8Q9UN66 801 aa15.56■□□□□ 0.08
VCAN-211ENST00000513984 FARP1Q9Y4F1 1045 aaPredicted RBP15.56■□□□□ 0.08
VCAN-211ENST00000513984 NRP1O14786 923 aa15.55■□□□□ 0.08
VCAN-211ENST00000513984 CAPN2P17655 700 aa15.55■□□□□ 0.08
VCAN-211ENST00000513984 CYP2F1P24903 491 aa15.55■□□□□ 0.08
VCAN-211ENST00000513984 YY1P25490 414 aa15.55■□□□□ 0.08
VCAN-211ENST00000513984 BFSP2Q13515 415 aa15.55■□□□□ 0.08
VCAN-211ENST00000513984 MAPRE1Q15691 268 aaKnown RBP15.55■□□□□ 0.08
VCAN-211ENST00000513984 PPP6R3Q5H9R7 873 aaPredicted RBP15.55■□□□□ 0.08
VCAN-211ENST00000513984 HFE2Q6ZVN8 426 aa15.55■□□□□ 0.08
VCAN-211ENST00000513984 ZNF771Q7L3S4 317 aaPredicted RBP15.55■□□□□ 0.08
VCAN-211ENST00000513984 OR10T2Q8NGX3 314 aa15.55■□□□□ 0.08
VCAN-211ENST00000513984 TLCD1Q96CP7 247 aa15.55■□□□□ 0.08
VCAN-211ENST00000513984 PWWP2AQ96N64 755 aa15.55■□□□□ 0.08
VCAN-211ENST00000513984 KCTD15Q96SI1 283 aaPredicted RBP15.55■□□□□ 0.08
VCAN-211ENST00000513984 DHX35Q9H5Z1 703 aaKnown RBP15.55■□□□□ 0.08
VCAN-211ENST00000513984 NRDE2Q9H7Z3 1164 aa15.55■□□□□ 0.08
VCAN-211ENST00000513984 NINJ2Q9NZG7 142 aa15.55■□□□□ 0.08
VCAN-211ENST00000513984 RCOR3Q9P2K3 495 aaPredicted RBP15.55■□□□□ 0.08
VCAN-211ENST00000513984 KANSL3Q9P2N6 904 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms