RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 EFEMP2O95967 443 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 ZBED1O96006 694 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 CYP2F1P24903 491 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 IVDP26440 423 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 RFC2P35250 354 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 PBX3P40426 434 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 KRT17Q04695 432 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 PTK6Q13882 451 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 HLTFQ14527 1009 aaKnown RBP eCLIP13.4□□□□□ -0.265e-7■■■□□ 16.8
PVT1-203ENST00000513868 DCAF6Q58WW2 860 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 C4orf50Q6ZRC1 276 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 SCML4Q8N228 414 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 CCDC185Q8N715 623 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 TSEN2Q8NCE0 465 aaKnown RBP13.4□□□□□ -0.26
PVT1-203ENST00000513868 SLC35B2Q8TB61 432 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 B3GALT6Q96L58 329 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 MAGEB5Q9BZ81 275 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 PCDH18Q9HCL0 1135 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 MTMR10Q9NXD2 777 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 OGFRQ9NZT2 677 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 SAE1Q9UBE0 346 aaPredicted RBP13.4□□□□□ -0.26
PVT1-203ENST00000513868 NAALADL1Q9UQQ1 740 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 TRIM43BA6NCK2 446 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 TNFRSF10BO14763 440 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 TBC1D4O60343 1298 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 UPP2O95045 317 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 L1CAMP32004 1257 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 SULT1E1P49888 294 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 DYNLT1P63172 113 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 PDK2Q15119 407 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 OASLQ15646 514 aaKnown RBP13.4□□□□□ -0.26
PVT1-203ENST00000513868 SLC39A12Q504Y0 691 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 ERMARDQ5T6L9 678 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 FUT10Q6P4F1 479 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 SYDE1Q6ZW31 735 aaPredicted RBP13.4□□□□□ -0.26
PVT1-203ENST00000513868 SPATA2LQ8IUW3 424 aaPredicted RBP13.4□□□□□ -0.26
PVT1-203ENST00000513868 LRRC43Q8N309 656 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 MREGQ8N565 214 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 GRK7Q8WTQ7 553 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 IRGQQ8WZA9 623 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 NKD2Q969F2 451 aaPredicted RBP13.4□□□□□ -0.26
PVT1-203ENST00000513868 TRIM43Q96BQ3 446 aaPredicted RBP13.4□□□□□ -0.26
PVT1-203ENST00000513868 HAUS1Q96CS2 278 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 RNF157Q96PX1 679 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 CALN1Q9BXU9 219 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 CWH43Q9H720 699 aa13.4□□□□□ -0.26
PVT1-203ENST00000513868 FEZ2Q9UHY8 353 aaPredicted RBP13.4□□□□□ -0.26
PVT1-203ENST00000513868 DRG1Q9Y295 367 aaKnown RBP13.4□□□□□ -0.26
PVT1-203ENST00000513868 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.279e-6■■■■■ 68.9
PVT1-203ENST00000513868 KIAA0355O15063 1070 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 TIMP1P01033 207 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 LTFP02788 710 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 DESP17661 470 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 KLRC2P26717 231 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 VCPP55072 806 aaKnown RBP13.39□□□□□ -0.27
PVT1-203ENST00000513868 OTUD4Q01804 1114 aaKnown RBP13.39□□□□□ -0.27
PVT1-203ENST00000513868 BYSLQ13895 437 aaKnown RBP13.39□□□□□ -0.27
PVT1-203ENST00000513868 PPP1R7Q15435 360 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 DPYSL2Q16555 572 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 RSPO2Q6UXX9 243 aaPredicted RBP13.39□□□□□ -0.27
PVT1-203ENST00000513868 TAS1R1Q7RTX1 841 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 VSIG1Q86XK7 387 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 CEP57Q86XR8 500 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 DCP1BQ8IZD4 617 aaKnown RBP13.39□□□□□ -0.27
PVT1-203ENST00000513868 PQLC3Q8N755 202 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 SCAMP5Q8TAC9 235 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 ACTL9Q8TC94 416 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 FAF2Q96CS3 445 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 PCDH10Q9P2E7 1040 aa13.39□□□□□ -0.27
PVT1-203ENST00000513868 ZNF487B1APH4 448 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 M0QYT0 321 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 PECAM1P16284 738 aaPredicted RBP13.38□□□□□ -0.27
PVT1-203ENST00000513868 HSPA9P38646 679 aaKnown RBP13.38□□□□□ -0.27
PVT1-203ENST00000513868 CTXN3Q4LDR2 81 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 ANKRD20A8PQ5CZ79 823 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 RTP2Q5QGT7 225 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 PRUNE1Q86TP1 453 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 FAM131BQ86XD5 332 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 RFX6Q8HWS3 928 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 ALLCQ8N6M5 410 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 GLIS1Q8NBF1 620 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 PCDH19Q8TAB3 1148 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 FBXO25Q8TCJ0 367 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 ART4Q93070 314 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 TOP1MTQ969P6 601 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 ZNF689Q96CS4 500 aaPredicted RBP13.38□□□□□ -0.27
PVT1-203ENST00000513868 FUBP3Q96I24 572 aaKnown RBP eCLIP13.38□□□□□ -0.279e-9■■■■■ 53.3
PVT1-203ENST00000513868 CCDC114Q96M63 670 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 TXLNGYQ9BZA5 131 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 PIGVQ9NUD9 493 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 FZD10Q9ULW2 581 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 STAP1Q9ULZ2 295 aa13.38□□□□□ -0.27
PVT1-203ENST00000513868 ABHD14A-ACY1A0A1B0GW23 586 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 OR6C75A6NL08 312 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 APOC4-APOC2K7ER74 178 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 AGPSO00116 658 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 RRP9O43818 475 aaKnown RBP13.37□□□□□ -0.27
PVT1-203ENST00000513868 VNN2O95498 520 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 GAS8O95995 478 aa13.37□□□□□ -0.27
PVT1-203ENST00000513868 APOC2P02655 101 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms