RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 NUMBLQ9Y6R0 609 aa10.29□□□□□ -0.76
TOPBP1-209ENST00000513818 COL4A3Q01955 1670 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 TRAV19A0A0A6YYK7 116 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 AKR1B15C9JRZ8 316 aaPredicted RBP10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 FGF19O95750 216 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 LSM8O95777 96 aaKnown RBP10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 OAS1P00973 400 aaKnown RBP10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 SERPING1P05155 500 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 TPM1P09493 284 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 MBL2P11226 248 aaPredicted RBP10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 UNGP13051 313 aaPredicted RBP10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 RARGP13631 454 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 TNFAIP3P21580 790 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 EIF4A3P38919 411 aaKnown RBP10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 RPL34P49207 117 aaKnown RBP10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 ZXDBP98169 803 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 HTR4Q13639 388 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 GRM2Q14416 872 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 HECTD3Q5T447 861 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 WDR59Q6PJI9 974 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 OLFML1Q6UWY5 402 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 TRIM72Q6ZMU5 477 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 MON1AQ86VX9 555 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 ERICH1Q86X53 443 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 ARID3BQ8IVW6 561 aaPredicted RBP10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 CMTM8Q8IZV2 173 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 TC2NQ8N9U0 490 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 WBP2Q969T9 261 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 IQCDQ96DY2 449 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 LRRC3BQ96PB8 259 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 NOX5Q96PH1 765 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 UHRF1Q96T88 793 aaPredicted RBP10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 DNAJC7Q99615 494 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 CHP1Q99653 195 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 NACA2Q9H009 215 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 CNGB3Q9NQW8 809 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 TLR8Q9NR97 1041 aaKnown RBP10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 COMMD8Q9NX08 183 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 EPS15L1Q9UBC2 864 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 USTQ9Y2C2 406 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 CPQQ9Y646 472 aa10.28□□□□□ -0.76
TOPBP1-209ENST00000513818 TRIOO75962 3097 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 MSI1O43347 362 aaKnown RBP10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 NARSO43776 548 aaKnown RBP10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 HMBSP08397 361 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 CCDC172P0C7W6 258 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 HDCP19113 662 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 AVPR1AP37288 418 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 ACADSBP45954 432 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 NSFP46459 744 aaKnown RBP10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 PITX1P78337 314 aaPredicted RBP10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 CENPCQ03188 943 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 GFPT1Q06210 699 aaPredicted RBP10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 EFEMP1Q12805 493 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 PTP4A2Q12974 167 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 C10orf120Q5SQS8 335 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 FAM102AQ5T9C2 384 aaPredicted RBP10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 BSPRYQ5W0U4 402 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 BTBD8Q5XKL5 378 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 PM20D1Q6GTS8 502 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 VITQ6UXI7 678 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 RSRC2Q7L4I2 434 aaKnown RBP10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 TMEM110Q86TL2 294 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 XYLT1Q86Y38 959 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 MIB1Q86YT6 1006 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 CNGA4Q8IV77 575 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 ZDHHC14Q8IZN3 488 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 OR8K1Q8NGG5 319 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 ADAM32Q8TC27 787 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 STK32AQ8WU08 396 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 OVCA2Q8WZ82 227 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 SYN2Q92777 582 aaPredicted RBP10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 SMARCD2Q92925 531 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 USP13Q92995 863 aaPredicted RBP10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 ZFYVE19Q96K21 471 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 ZFRQ96KR1 1074 aaKnown RBP10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 NUCKS1Q9H1E3 243 aaKnown RBP10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 METTL5Q9NRN9 209 aaKnown RBP10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 GKN1Q9NS71 199 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 SPTLC3Q9NUV7 552 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 GDE1Q9NZC3 331 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 PRKAG3Q9UGI9 489 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 SFMBT1Q9UHJ3 866 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 MUTYHQ9UIF7 546 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 NAALADL1Q9UQQ1 740 aa10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 KIF26AQ9ULI4 1882 aaPredicted RBP10.27□□□□□ -0.77
TOPBP1-209ENST00000513818 MUC3AQ02505 3323 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 SYNJ2BP-COX16A0A087WUM0 186 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 A0A087X0T9 212 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 HEPACAM2A8MVW5 462 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 ANHXE9PGG2 379 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 GPR37O15354 613 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 FBXO21O94952 628 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 OLFM2O95897 454 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 LTFP02788 710 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 FYNP06241 537 aa10.26□□□□□ -0.77
TOPBP1-209ENST00000513818 FAM228BP0C875 321 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms