RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 NDUFA10O95299 355 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 KRT3P12035 628 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 NCAM1P13591 858 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 GJA1P17302 382 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 CEBPBP17676 345 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 HDCP19113 662 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 ABCB4P21439 1286 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 CCR2P41597 374 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 GSCP56915 257 aaPredicted RBP16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 KRT83P78385 493 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 C2CD6Q53TS8 623 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 C10orf120Q5SQS8 335 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 DCUN1D2Q6PH85 259 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 BEND5Q7L4P6 421 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 SCD5Q86SK9 330 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 TMEM150AQ86TG1 271 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 ZNF276Q8N554 614 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 MAB21L3Q8N8X9 362 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 TDRD5Q8NAT2 981 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 CLEC4CQ8WTT0 213 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 NDRG1Q92597 394 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 FGF13Q92913 245 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 MCRS1Q96EZ8 462 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 EIF3CQ99613 913 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 PHF7Q9BWX1 381 aaPredicted RBP16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 NMUR1Q9HB89 426 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 TJP2Q9UDY2 1190 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 CNOT8Q9UFF9 292 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 CDH22Q9UJ99 828 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 STAP1Q9ULZ2 295 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 USTQ9Y2C2 406 aa16.48■□□□□ 0.23
SH3TC1-223ENST00000513495 TADA3O75528 432 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 DAB1O75553 588 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 RRM1P23921 792 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 RNASE9P60153 205 aaKnown RBP16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 GPC5P78333 572 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 PTP4A2Q12974 167 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 SMAD2Q15796 467 aaKnown RBP16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 TXNDC8Q6A555 127 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 KLHDC10Q6PID8 442 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 ARCQ7LC44 396 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 NPAS3Q8IXF0 933 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 CMTM8Q8IZV2 173 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 OLIG1Q8TAK6 271 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 ATXN2LQ8WWM7 1075 aaKnown RBP16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 EDEM1Q92611 657 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 TMEM51Q9NW97 253 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 RRN3Q9NYV6 651 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 MYO1AQ9UBC5 1043 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 DNMT3LQ9UJW3 386 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 INTUQ9ULD6 942 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 CDH23Q9H251 3354 aa16.47■□□□□ 0.23
SH3TC1-223ENST00000513495 OBSL1O75147 1896 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 DPYSL4O14531 572 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 GRAP2O75791 330 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 LCA5LO95447 670 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 OAS1P00973 400 aaKnown RBP16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 MBL2P11226 248 aaPredicted RBP16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 GBP1P32455 592 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 MAGEA1P43355 309 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 KPNA1P52294 538 aaPredicted RBP16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 GALCP54803 685 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 TFF2Q03403 129 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 DCAF6Q58WW2 860 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 MTSS1LQ765P7 747 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 PHLDB2Q86SQ0 1253 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 DDX42Q86XP3 938 aaKnown RBP eCLIP16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 PLCD3Q8N3E9 789 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 ZSCAN18Q8TBC5 510 aaPredicted RBP16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 FEZF2Q8TBJ5 459 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 E2F7Q96AV8 911 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 CCSER2Q9H7U1 834 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 PRDM6Q9NQX0 595 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 METTL5Q9NRN9 209 aaKnown RBP16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 DENND4CQ5VZ89 1909 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 DOCK6Q96HP0 2047 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 NOTCH4Q99466 2003 aa16.46■□□□□ 0.23
SH3TC1-223ENST00000513495 DENND4AQ7Z401 1863 aa16.46■□□□□ 0.22
SH3TC1-223ENST00000513495 C2orf78A6NCI8 922 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 SIGLEC16A6NMB1 481 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 COCHO43405 550 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 MOSPD3O75425 235 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 TMEM253P0C7T8 217 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 LAMP2P13473 410 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 SDC4P31431 198 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 NOS2P35228 1153 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 MATKP42679 507 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 EFEMP1Q12805 493 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 HFE2Q6ZVN8 426 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 SND1Q7KZF4 910 aaKnown RBP eCLIP16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 BHLHA9Q7RTU4 235 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 KIAA1328Q86T90 577 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 TMEM139Q8IV31 216 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 DEFB106AQ8N104 65 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 ARL14EPQ8N8R7 260 aaPredicted RBP16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 SMARCD2Q92925 531 aa16.45■□□□□ 0.22
SH3TC1-223ENST00000513495 SERPINB11Q96P15 392 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms