RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 RBAKQ9NYW8 714 aaPredicted RBP11.16□□□□□ -0.62
CLDND1-227ENST00000513452 USP36Q9P275 1121 aaKnown RBP11.16□□□□□ -0.62
CLDND1-227ENST00000513452 EIF2B4Q9UI10 523 aaKnown RBP11.16□□□□□ -0.62
CLDND1-227ENST00000513452 SIX4Q9UIU6 781 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 PTPRQQ9UMZ3 2332 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 KCNJ18B7U540 433 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 RRP8O43159 456 aaKnown RBP11.15□□□□□ -0.62
CLDND1-227ENST00000513452 CACNG3O60359 315 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 TMEM191BP0C7N4 346 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 DDIT3P35638 169 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 GRK6P43250 576 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 CSNK1EP49674 416 aaKnown RBP11.15□□□□□ -0.62
CLDND1-227ENST00000513452 NEK4P51957 841 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 CLDN6P56747 220 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 STARD3Q14849 445 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 FUT11Q495W5 492 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 HS2ST1Q7LGA3 356 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 CACUL1Q86Y37 369 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 MYCBPAPQ8TBZ2 947 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 NOC3LQ8WTT2 800 aaKnown RBP11.15□□□□□ -0.62
CLDND1-227ENST00000513452 FBXO32Q969P5 355 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 BBS2Q9BXC9 721 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 TRIM9Q9C026 710 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 CCSER2Q9H7U1 834 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 TMEM30AQ9NV96 361 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 GMIPQ9P107 970 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 SLCO1B1Q9Y6L6 691 aa11.15□□□□□ -0.62
CLDND1-227ENST00000513452 PYCARD-AS1I3L0S3 204 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 TYRP14679 529 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 WARSP23381 471 aaKnown RBP11.14□□□□□ -0.63
CLDND1-227ENST00000513452 YWHAQP27348 245 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 TPMTP51580 245 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 MCM6Q14566 821 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 POSTNQ15063 836 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 KIF19Q2TAC6 998 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 HECTD3Q5T447 861 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 C6orf118Q5T5N4 469 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 TPGS1Q6ZTW0 290 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 GPR155Q7Z3F1 870 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 TMPRSS12Q86WS5 348 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 FAM184AQ8NB25 1140 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 PDZD8Q8NEN9 1154 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 ENGASEQ8NFI3 743 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 BHMTQ93088 406 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 HPDLQ96IR7 371 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 XPO6Q96QU8 1125 aaKnown RBP11.14□□□□□ -0.63
CLDND1-227ENST00000513452 ZNF518BQ9C0D4 1074 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 MKRN2Q9H000 416 aaKnown RBP11.14□□□□□ -0.63
CLDND1-227ENST00000513452 NACA2Q9H009 215 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 PDE11AQ9HCR9 933 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 BLOC1S4Q9NUP1 217 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 FTSJ1Q9UET6 329 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 R3HCC1Q9Y3T6 440 aaKnown RBP11.14□□□□□ -0.63
CLDND1-227ENST00000513452 SNX11Q9Y5W9 270 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 AK5Q9Y6K8 562 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 STON1Q9Y6Q2 735 aa11.14□□□□□ -0.63
CLDND1-227ENST00000513452 TEX51A0A1B0GUA7 166 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 GOLGA8IPA6NC78 632 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 GOLGA8JA6NMD2 632 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 METTL12A8MUP2 240 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 GFRA2O00451 464 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 CLDN5O00501 218 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 OXTRP30559 389 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 HNF1BP35680 557 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 DGKGP49619 791 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 CCT8P50990 548 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 AFF3P51826 1226 aaKnown RBP11.13□□□□□ -0.63
CLDND1-227ENST00000513452 IL9RQ01113 521 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 KCNA1Q09470 495 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 SF3A1Q15459 793 aaKnown RBP11.13□□□□□ -0.63
CLDND1-227ENST00000513452 PCSK4Q6UW60 755 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 LAYNQ6UX15 382 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 DPH6Q7L8W6 267 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 LIMS2Q7Z4I7 341 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 METTL3Q86U44 580 aaKnown RBP11.13□□□□□ -0.63
CLDND1-227ENST00000513452 FAM124AQ86V42 546 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 SFR1Q86XK3 245 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 RASSF8Q8NHQ8 419 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 C1orf216Q8TAB5 229 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 BAP1Q92560 729 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 HVCN1Q96D96 273 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 CALML4Q96GE6 196 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 MMS19Q96T76 1030 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 LLPHQ9BRT6 129 aaKnown RBP11.13□□□□□ -0.63
CLDND1-227ENST00000513452 ELOVL4Q9GZR5 314 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 ST6GALNAC4Q9H4F1 302 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 ITM2CQ9NQX7 267 aa11.13□□□□□ -0.63
CLDND1-227ENST00000513452 PTPRJQ12913 1337 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 KCNK3O14649 394 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 ARHGAP6O43182 974 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 RTN3O95197 1032 aaPredicted RBP11.12□□□□□ -0.63
CLDND1-227ENST00000513452 JUPP14923 745 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 CXADRP78310 365 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 HMGN5P82970 282 aaKnown RBP11.12□□□□□ -0.63
CLDND1-227ENST00000513452 TEAD4Q15561 434 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 INAVAQ3KP66 663 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 TAF1BQ53T94 588 aaPredicted RBP11.12□□□□□ -0.63
CLDND1-227ENST00000513452 ZNF720Q7Z2F6 126 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 NUP93Q8N1F7 819 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 SCAMP5Q8TAC9 235 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms