RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 FRMD5Q7Z6J6 570 aa7.44□□□□□ -1.22
RFC1-215ENST00000512881 CD302Q8IX05 232 aa7.44□□□□□ -1.22
RFC1-215ENST00000512881 ING5Q8WYH8 240 aa7.44□□□□□ -1.22
RFC1-215ENST00000512881 LARP4BQ92615 738 aaKnown RBP7.44□□□□□ -1.22
RFC1-215ENST00000512881 UBE2FQ969M7 185 aa7.44□□□□□ -1.22
RFC1-215ENST00000512881 TCEAL4Q96EI5 215 aa7.44□□□□□ -1.22
RFC1-215ENST00000512881 SHDQ96IW2 340 aa7.44□□□□□ -1.22
RFC1-215ENST00000512881 TMEM74Q96NL1 305 aa7.44□□□□□ -1.22
RFC1-215ENST00000512881 CLIC6Q96NY7 704 aa7.44□□□□□ -1.22
RFC1-215ENST00000512881 TSPAN18Q96SJ8 248 aa7.44□□□□□ -1.22
RFC1-215ENST00000512881 FIZ1Q96SL8 496 aa7.44□□□□□ -1.22
RFC1-215ENST00000512881 KXD1Q9BQD3 176 aa7.44□□□□□ -1.22
RFC1-215ENST00000512881 AFF4Q9UHB7 1163 aaKnown RBP7.44□□□□□ -1.22
RFC1-215ENST00000512881 FBXO2Q9UK22 296 aaPredicted RBP7.44□□□□□ -1.22
RFC1-215ENST00000512881 CPSF3Q9UKF6 684 aaKnown RBP7.44□□□□□ -1.22
RFC1-215ENST00000512881 POLR3KQ9Y2Y1 108 aaPredicted RBP7.44□□□□□ -1.22
RFC1-215ENST00000512881 SIT1Q9Y3P8 196 aa7.44□□□□□ -1.22
RFC1-215ENST00000512881 TIMM13Q9Y5L4 95 aaPredicted RBP7.44□□□□□ -1.22
RFC1-215ENST00000512881 SRPRBQ9Y5M8 271 aaKnown RBP7.44□□□□□ -1.22
RFC1-215ENST00000512881 RIF1Q5UIP0 2472 aaKnown RBP7.44□□□□□ -1.22
RFC1-215ENST00000512881 UPK3BL1B0FP48 263 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 UPK3BL2E5RIL1 263 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 ZNF197O14709 1029 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 XPOTO43592 962 aaKnown RBP7.43□□□□□ -1.22
RFC1-215ENST00000512881 ECI2O75521 394 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 ESR1P03372 595 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 DCNP07585 359 aaKnown RBP7.43□□□□□ -1.22
RFC1-215ENST00000512881 CEBPBP17676 345 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 GDNFP39905 211 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 AARSP49588 968 aaKnown RBP eCLIP7.43□□□□□ -1.22
RFC1-215ENST00000512881 ACOT2P49753 483 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 STARD6P59095 220 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 LILRA4P59901 499 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 PFKPQ01813 784 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 CEBPZQ03701 1054 aaKnown RBP7.43□□□□□ -1.22
RFC1-215ENST00000512881 YWHAHQ04917 246 aaPredicted RBP7.43□□□□□ -1.22
RFC1-215ENST00000512881 TWF1Q12792 350 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 RESTQ13127 1097 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 SNW1Q13573 536 aaKnown RBP7.43□□□□□ -1.22
RFC1-215ENST00000512881 CYP4A22Q5TCH4 519 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 SPATA1Q5VX52 437 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 RRAGBQ5VZM2 374 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 ADALQ6DHV7 355 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 TANGO2Q6ICL3 276 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 JADE1Q6IE81 842 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 SLFN12LQ6IEE8 588 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 IQCEQ6IPM2 695 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 ASCL5Q7RTU5 278 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 ZNF720Q7Z2F6 126 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 USP37Q86T82 979 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 ELMOD1Q8N336 334 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 FAM13CQ8NE31 585 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 BEST2Q8NFU1 509 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 INTS4Q96HW7 963 aaKnown RBP7.43□□□□□ -1.22
RFC1-215ENST00000512881 ZNF512Q96ME7 567 aaPredicted RBP7.43□□□□□ -1.22
RFC1-215ENST00000512881 ALPK1Q96QP1 1244 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 PANK2Q9BZ23 570 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 PLA2G2FQ9BZM2 168 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 ST6GALNAC4Q9H4F1 302 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 CEP72Q9P209 647 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 INSL5Q9Y5Q6 135 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 STYXL1Q9Y6J8 313 aa7.43□□□□□ -1.22
RFC1-215ENST00000512881 ZNF292O60281 2723 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 KANSL1LA0AUZ9 987 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 MYMKA6NI61 221 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 OR6C75A6NL08 312 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 TISP43B9A030 160 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 PIRO00625 290 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 PPEF2O14830 753 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 VNN2O95498 520 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 OR4Q2P0C623 313 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 GLULP15104 373 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 TYMPP19971 482 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 GARTP22102 1010 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 PAX3P23760 479 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 ADSSP30520 456 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 CCR2P41597 374 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 MESP2Q0VG99 397 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 DUSP4Q13115 394 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 GPR17Q13304 367 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 FZD5Q13467 585 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 TMEM132DQ14C87 1099 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 SLC39A14Q15043 492 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 MLF2Q15773 248 aaPredicted RBP7.42□□□□□ -1.22
RFC1-215ENST00000512881 FAM78AQ5JUQ0 283 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 C9orf57Q5W0N0 161 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 OVOS1Q6IE37 1185 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 PDZD4Q76G19 769 aaPredicted RBP7.42□□□□□ -1.22
RFC1-215ENST00000512881 SFR1Q86XK3 245 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 NKD2Q969F2 451 aaPredicted RBP7.42□□□□□ -1.22
RFC1-215ENST00000512881 ELSPBP1Q96BH3 223 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 DNAJC19Q96DA6 116 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 SENP8Q96LD8 212 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 ZSWIM3Q96MP5 696 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 DDX23Q9BUQ8 820 aaKnown RBP7.42□□□□□ -1.22
RFC1-215ENST00000512881 RSRP1Q9BUV0 290 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 STRA6Q9BX79 667 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 BACH2Q9BYV9 841 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 IKZF4Q9H2S9 585 aa7.42□□□□□ -1.22
RFC1-215ENST00000512881 ASB7Q9H672 318 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms