RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 MYF5P13349 255 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 RGS19P49795 217 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 CFHR3Q02985 330 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 SLC29A2Q14542 456 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 GPR162Q16538 588 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 NFE2Q16621 373 aaPredicted RBP2.78□□□□□ -1.96
PDGFC-208ENST00000512711 FAM102BQ5T8I3 360 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 MANEALQ5VSG8 457 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 PLAG1Q6DJT9 500 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 MRPL10Q7Z7H8 261 aaKnown RBP2.78□□□□□ -1.96
PDGFC-208ENST00000512711 ZDHHC17Q8IUH5 632 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 HS6ST2Q96MM7 605 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 TM2D2Q9BX73 214 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 USP29Q9HBJ7 922 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 AGO4Q9HCK5 861 aaKnown RBP2.78□□□□□ -1.96
PDGFC-208ENST00000512711 NKX1-2Q9UD57 310 aaPredicted RBP2.78□□□□□ -1.96
PDGFC-208ENST00000512711 AFF4Q9UHB7 1163 aaKnown RBP2.78□□□□□ -1.96
PDGFC-208ENST00000512711 ITGB1BP2Q9UKP3 347 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 SLC27A6Q9Y2P4 619 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 LRP12Q9Y561 859 aa2.78□□□□□ -1.96
PDGFC-208ENST00000512711 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.78□□□□□ -1.96
PDGFC-208ENST00000512711 MBD3L4A6NDZ8 208 aaPredicted RBP2.77□□□□□ -1.97
PDGFC-208ENST00000512711 MBD3L3A6NE82 208 aaPredicted RBP2.77□□□□□ -1.97
PDGFC-208ENST00000512711 RRHO14718 337 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 CCP110O43303 1012 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 TMPRSS11DO60235 418 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 FGF2P09038 288 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 TXNP10599 105 aaKnown RBP2.77□□□□□ -1.97
PDGFC-208ENST00000512711 CTSAP10619 480 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 TPH1P17752 444 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 KLRC1P26715 233 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 CCKBRP32239 447 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 THBS4P35443 961 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 CPT1AP50416 773 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 HTRA4P83105 476 aaPredicted RBP2.77□□□□□ -1.97
PDGFC-208ENST00000512711 GALEQ14376 348 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 KCNB1Q14721 858 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 GRM3Q14832 879 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 MINDY4Q4G0A6 757 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 EARS2Q5JPH6 523 aaKnown RBP2.77□□□□□ -1.97
PDGFC-208ENST00000512711 ODR4Q5SWX8 454 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 CXorf57Q6NSI4 855 aaKnown RBP2.77□□□□□ -1.97
PDGFC-208ENST00000512711 TFAP2DQ7Z6R9 452 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 PIGOQ8TEQ8 1089 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 APIPQ96GX9 242 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 HIST1H2AAQ96QV6 131 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 DHX36Q9H2U1 1008 aaKnown RBP2.77□□□□□ -1.97
PDGFC-208ENST00000512711 SAP30LQ9HAJ7 183 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 SNX15Q9NRS6 342 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 VPS45Q9NRW7 570 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 TBC1D23Q9NUY8 699 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 VPS51Q9UID3 782 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 ZNF580Q9UK33 172 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 FZD4Q9ULV1 537 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 EID1Q9Y6B2 187 aa2.77□□□□□ -1.97
PDGFC-208ENST00000512711 ZMYM2Q9UBW7 1377 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 CCDC187A0A096LP49 1063 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 MYMKA6NI61 221 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 CD8B2A6NJW9 211 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 FAM227AF5H4B4 570 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 M0R3H8 397 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 FRS3O43559 492 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 ALPLP05186 524 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 TMEM191BP0C7N4 346 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 PHKG2P15735 406 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 ACVR2AP27037 513 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 TKTP29401 623 aaKnown RBP2.76□□□□□ -1.97
PDGFC-208ENST00000512711 CCKARP32238 428 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 GALNSP34059 522 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 HTR7P34969 479 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 PLCD1P51178 756 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 COPAP53621 1224 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 MTAPQ13126 283 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 STIM1Q13586 685 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 KPNB1Q14974 876 aaKnown RBP2.76□□□□□ -1.97
PDGFC-208ENST00000512711 KIAA0753Q2KHM9 967 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 PLEKHG6Q3KR16 790 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 KLHL22Q53GT1 634 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 RRAGBQ5VZM2 374 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 CYB5RLQ6IPT4 315 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 CRELD2Q6UXH1 353 aaPredicted RBP2.76□□□□□ -1.97
PDGFC-208ENST00000512711 CCDC149Q6ZUS6 474 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 MAGEB6Q8N7X4 407 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 FAM71DQ8N9W8 422 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 ADAMTS15Q8TE58 950 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 NSMCE1Q8WV22 266 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 LRTOMTQ8WZ04 291 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 SCNM1Q9BWG6 230 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 APOL5Q9BWW9 433 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 ZNF287Q9HBT7 754 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 C1orf112Q9NSG2 853 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 SEMA5BQ9P283 1151 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 OGDHLQ9ULD0 1010 aa2.76□□□□□ -1.97
PDGFC-208ENST00000512711 A0A087WZ62 844 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 LOC105371045A0A1W2PR82 267 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 A8MVJ9 347 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 TPP1O14773 563 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 MARCH6O60337 910 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 CRYABP02511 175 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms