RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 CAB39LQ9H9S4 337 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 TUBGCP4Q9UGJ1 667 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 NR2E1Q9Y466 385 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 IQCMA0A1B0GVH7 501 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 POLBP06746 335 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 ARF4P18085 180 aaPredicted RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 DGKEP52429 567 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 AP1S1P61966 158 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 IQSEC1Q6DN90 963 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 C11orf57Q6ZUT1 292 aaPredicted RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 ENOSF1Q7L5Y1 443 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 SFR1Q86XK3 245 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 DNAAF1Q8NEP3 725 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 OR10Q1Q8NGQ4 319 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 KCNJ9Q92806 393 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 VPS35Q96QK1 796 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 SPRTNQ9H040 489 aaPredicted RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 MRPS33Q9Y291 106 aaKnown RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 PCDHGA6Q9Y5G7 932 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 ZFYVE9O95405 1425 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 FAM25AB3EWG3 89 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 FAM25CB3EWG5 89 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 FAM25GB3EWG6 89 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 ABCB1P08183 1280 aaPredicted RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 LBPP18428 481 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 GARTP22102 1010 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 PAICSP22234 425 aaKnown RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 KCNA5P22460 613 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 GPS1Q13098 491 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 TOB2Q14106 344 aaPredicted RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 BOP1Q14137 746 aaKnown RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 NFE2Q16621 373 aaPredicted RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 NDUFA9Q16795 377 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 EID3Q8N140 333 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 RTL3Q8N8U3 475 aaKnown RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 TSTD1Q8NFU3 115 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 CHMP1AQ9HD42 196 aaPredicted RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 BTBD3Q9Y2F9 522 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 FAM220BPB1ANY3 271 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 GPC5P78333 572 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 GLRA4Q5JXX5 417 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 EPHA10Q5JZY3 1008 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 SUSD4Q5VX71 490 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 ZC3H14Q6PJT7 736 aaKnown RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 USP17L6PQ6QN14 398 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 EPM2AIP1Q7L775 607 aaPredicted RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 IFNEQ86WN2 208 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 SERPINB12Q96P63 405 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 RNF26Q9BY78 433 aaPredicted RBP9.2□□□□□ -0.94
VCAN-208ENST00000512590 VAV3Q9UKW4 847 aa9.2□□□□□ -0.94
VCAN-208ENST00000512590 CYP2D7A0A087X1C5 515 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 TMEM191CA6NGB0 347 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 ANKDD1BA6NHY2 528 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 MICAL2O94851 1124 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 FTCDO95954 541 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 ACO1P21399 889 aaKnown RBP9.19□□□□□ -0.94
VCAN-208ENST00000512590 RPA1P27694 616 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 GRIK3Q13003 919 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 MAP2K5Q13163 448 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 RAB30Q15771 203 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 C1orf146Q5VVC0 180 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 CDC73Q6P1J9 531 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 FAM9CQ8IZT9 166 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 ECSITQ9BQ95 431 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 OSBPL5Q9H0X9 879 aaPredicted RBP9.19□□□□□ -0.94
VCAN-208ENST00000512590 PSME2Q9UL46 239 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 OVOS2A0A0G2JMS6 1433 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 OVOS2A0A0J9YW53 1432 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 OVOS2Q6IE36 1432 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 CTNND1O60716 968 aaKnown RBP9.19□□□□□ -0.94
VCAN-208ENST00000512590 PMPCBO75439 489 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 SCGB2A1O75556 95 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 ANXA6P08133 673 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 MYL2P10916 166 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 C6P13671 934 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 TGM2P21980 687 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 PCYT1AP49585 367 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 CDH13P55290 713 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 AMHR2Q16671 573 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 SGSM1Q2NKQ1 1148 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 BHLHB9Q6PI77 547 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 LPCAT1Q8NF37 534 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 ADCY4Q8NFM4 1077 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 ZHX1-C8orf76Q96EF9 292 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 CLDND1Q9NY35 253 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 NKIRAS2Q9NYR9 191 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 ARL2BPQ9Y2Y0 163 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 A0A1W2PP64 1363 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 GMFGO60234 142 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 DEAF1O75398 565 aaPredicted RBP9.19□□□□□ -0.94
VCAN-208ENST00000512590 MFN2O95140 757 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 FGF19O95750 216 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 GHRP10912 638 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 RPA3P35244 121 aaPredicted RBP9.19□□□□□ -0.94
VCAN-208ENST00000512590 PPM1AP35813 382 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 ERVK-21P61565 698 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 PDIA2Q13087 525 aaKnown RBP9.19□□□□□ -0.94
VCAN-208ENST00000512590 SPATA1Q5VX52 437 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 ULK3Q6PHR2 472 aa9.19□□□□□ -0.94
VCAN-208ENST00000512590 KCTD8Q6ZWB6 473 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms