RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 GHRP10912 638 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 ATF2P15336 505 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 PTPN1P18031 435 aaKnown RBP13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 KDELR1P24390 212 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 CD52P31358 61 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 SDC4P31431 198 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 PLTPP55058 493 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 VCPP55072 806 aaKnown RBP13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 BYSLQ13895 437 aaKnown RBP13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 TFDP2Q14188 446 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 TUBB8Q3ZCM7 444 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 ATP13A4Q4VNC1 1196 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 EFHC1Q5JVL4 640 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 OSTM1Q86WC4 334 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 MAP7D3Q8IWC1 876 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 EMC1Q8N766 993 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 FBXO25Q8TCJ0 367 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 SENP8Q96LD8 212 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 DUSP16Q9BY84 665 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 PRDM16Q9HAZ2 1276 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 GOLGA2P5Q9HBQ8 144 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 TLR9Q9NR96 1032 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 ASIC3Q9UHC3 531 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 CDH9Q9ULB4 789 aa13.71□□□□□ -0.21
DEPDC1B-206ENST00000512452 GOLGA6CA6NDK9 693 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 C19orf67A6NJJ6 358 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 HMGB1P1B2RPK0 211 aaPredicted RBP13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 EOMESO95936 686 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 CYP11A1P05108 521 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 PDGFRBP09619 1106 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 NUDT17P0C025 328 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 GOLGA6DP0CG33 693 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 ODC1P11926 461 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 RARGP13631 454 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 LMO2P25791 158 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 IVDP26440 423 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 IL1R2P27930 398 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 PCSK1P29120 753 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 RGS7P49802 495 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 PMS2P54278 862 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 ZP2Q05996 745 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 TUSC3Q13454 348 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 SNX1Q13596 522 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 OASLQ15646 514 aaKnown RBP13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 UAP1Q16222 522 aaPredicted RBP13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 WSCD1Q658N2 575 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 RHBDF2Q6PJF5 856 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 TRMT10CQ7L0Y3 403 aaKnown RBP13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 ANKS1BQ7Z6G8 1248 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 ZNF598Q86UK7 904 aaKnown RBP13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 KCTD6Q8NC69 237 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 SLC35B2Q8TB61 432 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 SLC2A14Q8TDB8 520 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 ATG4AQ8WYN0 398 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 CENPIQ92674 756 aaPredicted RBP13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 EDAQ92838 391 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 RMDN1Q96DB5 314 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 CCDC114Q96M63 670 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 PPP1R12CQ9BZL4 782 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 PABPC3Q9H361 631 aaKnown RBP13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 ZWILCHQ9H900 591 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 GOLGA6AQ9NYA3 693 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 ADAM21Q9UKJ8 722 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 PLAAQ9Y263 795 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 NFS1Q9Y697 457 aa13.7□□□□□ -0.22
DEPDC1B-206ENST00000512452 TMEM221A6NGB7 291 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 M0R296 226 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 MDM4O15151 490 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 MGEA5O60502 916 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 FBXO21O94952 628 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 CCDC130P13994 396 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 NPR3P17342 541 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 KLRC2P26717 231 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 ADORA2BP29275 332 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 RDXP35241 583 aaKnown RBP13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 FLT3P36888 993 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 SCNN1GP51170 649 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 ARSEP51690 589 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 UPP1Q16831 310 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 CCDC14Q49A88 953 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 AGBL2Q5U5Z8 902 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 EMC10Q5UCC4 262 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 TXNRD3NBQ6F5E7 133 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 DSTYKQ6XUX3 929 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 STRADAQ7RTN6 431 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 METTL23Q86XA0 190 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 ECHDC2Q86YB7 292 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 RELL1Q8IUW5 271 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 PSTKQ8IV42 348 aaKnown RBP13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 FUKQ8N0W3 1084 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 FBXL6Q8N531 539 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 ALLCQ8N6M5 410 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 FAM76AQ8TAV0 307 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 UBLCP1Q8WVY7 318 aaPredicted RBP13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 ADAM2Q99965 735 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 SYT15Q9BQS2 421 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 C11orf84Q9BUA3 381 aaPredicted RBP13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 DDX23Q9BUQ8 820 aaKnown RBP13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 TMEM109Q9BVC6 243 aa13.69□□□□□ -0.22
DEPDC1B-206ENST00000512452 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms