RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 NUDT18Q6ZVK8 323 aa15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 GPRIN1Q7Z2K8 1008 aa15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 TRMT11Q7Z4G4 463 aaKnown RBP15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 TTC30AQ86WT1 665 aa15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 TMEM25Q86YD3 366 aa15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 OLIG1Q8TAK6 271 aa15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 KCNV2Q8TDN2 545 aa15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 WHAMMQ8TF30 809 aa15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 CYFIP2Q96F07 1278 aa15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 TWNKQ96RR1 684 aa15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 EDEM2Q9BV94 578 aa15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 DNAI2Q9GZS0 605 aa15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 APOBEC3GQ9HC16 384 aaKnown RBP15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.53■□□□□ 0.084e-7■■■■■ 137
CCHCR1-229ENST00000512418 DEC1Q9P2X7 70 aa15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 PCDHA5Q9Y5H7 936 aa15.53■□□□□ 0.08
CCHCR1-229ENST00000512418 ABCA7Q8IZY2 2146 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 NUP205Q92621 2012 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 HHLA1C9JL84 531 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 CYP26A1O43174 497 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 ADAM23O75077 832 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 PSMC2P35998 433 aaKnown RBP15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 ATP5C1P36542 298 aaKnown RBP15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 EMC10Q5UCC4 262 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 HTR3DQ70Z44 454 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 CYP2U1Q7Z449 544 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 NAT16Q8N8M0 369 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 TERB1Q8NA31 727 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 CCDC150Q8NCX0 1101 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 WBP2Q969T9 261 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 SPACA7Q96KW9 195 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 KLF16Q9BXK1 252 aaPredicted RBP15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 TMEM8AQ9HCN3 771 aa15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 BCCIPQ9P287 314 aaKnown RBP eCLIP15.52■□□□□ 0.08
CCHCR1-229ENST00000512418 THADAQ6YHU6 1953 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 EPG5Q9HCE0 2579 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 LNP1A1A4G5 178 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 GREM1O60565 184 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 CILPO75339 1184 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 TBX18O95935 607 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 CD58P19256 250 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 ACO1P21399 889 aaKnown RBP15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 GTF2H1P32780 548 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 P2RY2P41231 377 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 ADAM9Q13443 819 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 ZCWPW2Q504Y3 356 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 KRT39Q6A163 491 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 KLHDC10Q6PID8 442 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 ZNF513Q8N8E2 541 aaPredicted RBP15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 JAKMIP2Q96AA8 810 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 CCDC34Q96HJ3 373 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 LSM14BQ9BX40 385 aaKnown RBP15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 MMRN2Q9H8L6 949 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 ZDHHC4Q9NPG8 344 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 OSER1Q9NX31 292 aa15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 LSM7Q9UK45 103 aaKnown RBP15.51■□□□□ 0.07
CCHCR1-229ENST00000512418 TCRBV21S2A2A0A5A6 115 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 KHNYNO15037 678 aaKnown RBP15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 CACNG3O60359 315 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 ZNF202O95125 648 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 DHPSP49366 369 aaPredicted RBP15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 KIF11P52732 1056 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 BYSLQ13895 437 aaKnown RBP15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 EDRF1Q3B7T1 1238 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 C10orf76Q5T2E6 689 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 LPCAT2Q7L5N7 544 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 TADA2BQ86TJ2 420 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 HMGB4Q8WW32 186 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 RLN3Q8WXF3 142 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 FAXDC2Q96IV6 333 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 XPO6Q96QU8 1125 aaKnown RBP15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 BBS2Q9BXC9 721 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 GOLPH3LQ9H4A5 285 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 NMUR1Q9HB89 426 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 MARK1Q9P0L2 795 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 WDR35Q9P2L0 1181 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 CIZ1Q9ULV3 898 aaPredicted RBP15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 PLXND1Q9Y4D7 1925 aa15.5■□□□□ 0.07
CCHCR1-229ENST00000512418 MYO18AQ92614 2054 aaKnown RBP15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 A0A1W2PQH9 124 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 NEDD8-MDP1E9PL57 170 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 RARGP13631 454 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 TYRP14679 529 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 PSEN1P49768 467 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 MXI1P50539 228 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 MCCD1P59942 119 aaPredicted RBP15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 SPDYCQ5MJ68 293 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 N4BP2L1Q5TBK1 243 aaPredicted RBP15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 GRAMD4Q6IC98 578 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 CCDC186Q7Z3E2 898 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 PGBD3Q8N328 593 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 TTC39CQ8N584 583 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 DNAJC17Q9NVM6 304 aaKnown RBP15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 DNMT3LQ9UJW3 386 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 NAGPAQ9UK23 515 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 STARD13Q9Y3M8 1113 aa15.49■□□□□ 0.07
CCHCR1-229ENST00000512418 CACNA1BQ00975 2339 aa15.48■□□□□ 0.07
CCHCR1-229ENST00000512418 TRIM24O15164 1050 aa15.48■□□□□ 0.07
CCHCR1-229ENST00000512418 MAP3K13O43283 966 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms