RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 WASH3PC4AMC7 463 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 TK2O00142 265 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 ATXN7O15265 892 aaPredicted RBP12.96□□□□□ -0.33
DDR1-267ENST00000512336 FLRT2O43155 660 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 SLC26A4O43511 780 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 IRF1P10914 325 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 NCAM1P13591 858 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 WARSP23381 471 aaKnown RBP12.96□□□□□ -0.33
DDR1-267ENST00000512336 ITPKBP27987 946 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 DEKP35659 375 aaKnown RBP12.96□□□□□ -0.33
DDR1-267ENST00000512336 MYO1EQ12965 1108 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 GSE1Q14687 1217 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 RILPL1Q5EBL4 403 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 ARL6IP4Q66PJ3 421 aaKnown RBP12.96□□□□□ -0.33
DDR1-267ENST00000512336 MCTP1Q6DN14 999 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 CLEC17AQ6ZS10 378 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 HS2ST1Q7LGA3 356 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 PDCD7Q8N8D1 485 aaKnown RBP12.96□□□□□ -0.33
DDR1-267ENST00000512336 NOC3LQ8WTT2 800 aaKnown RBP12.96□□□□□ -0.33
DDR1-267ENST00000512336 SCFD1Q8WVM8 642 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 FBXO32Q969P5 355 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 HPDLQ96IR7 371 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 STRA6Q9BX79 667 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 TRIM9Q9C026 710 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 ZNF518BQ9C0D4 1074 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 CCSER2Q9H7U1 834 aa12.96□□□□□ -0.33
DDR1-267ENST00000512336 WSB2Q9NYS7 404 aaPredicted RBP12.96□□□□□ -0.33
DDR1-267ENST00000512336 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.96□□□□□ -0.33
DDR1-267ENST00000512336 R3HCC1Q9Y3T6 440 aaKnown RBP12.96□□□□□ -0.33
DDR1-267ENST00000512336 PTPRJQ12913 1337 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 KCNJ18B7U540 433 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 NEDD8-MDP1E9PL57 170 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 BCAT2O15382 392 aaPredicted RBP12.95□□□□□ -0.34
DDR1-267ENST00000512336 LDHAP00338 332 aaKnown RBP12.95□□□□□ -0.34
DDR1-267ENST00000512336 YWHAQP27348 245 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 CCDC157Q569K6 752 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 HECTD3Q5T447 861 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 DCAF12L1Q5VU92 463 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 IL27RAQ6UWB1 636 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 DBX2Q6ZNG2 339 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 NUP93Q8N1F7 819 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 KRI1Q8N9T8 703 aaKnown RBP12.95□□□□□ -0.34
DDR1-267ENST00000512336 PDZD8Q8NEN9 1154 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 OR5B17Q8NGF7 314 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 RASSF8Q8NHQ8 419 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 ANKRD36BP1Q96IX9 119 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 AK8Q96MA6 479 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 DUSP9Q99956 384 aaKnown RBP12.95□□□□□ -0.34
DDR1-267ENST00000512336 MRPL45Q9BRJ2 306 aaKnown RBP12.95□□□□□ -0.34
DDR1-267ENST00000512336 CBWD1Q9BRT8 395 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 INTS13Q9NVM9 706 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 USP36Q9P275 1121 aaKnown RBP12.95□□□□□ -0.34
DDR1-267ENST00000512336 CHORDC1Q9UHD1 332 aaPredicted RBP12.95□□□□□ -0.34
DDR1-267ENST00000512336 EXOC7Q9UPT5 735 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 NFE2L3Q9Y4A8 694 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 PCDHGB2Q9Y5G2 931 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 NAV2Q8IVL1 2488 aa12.95□□□□□ -0.34
DDR1-267ENST00000512336 MGAQ8IWI9 3026 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 A0A1B0GVT2 93 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 CLDN5O00501 218 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 CACNG3O60359 315 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 CD2BP2O95400 341 aaKnown RBP12.94□□□□□ -0.34
DDR1-267ENST00000512336 TYRP14679 529 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 GARTP22102 1010 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 GNL1P36915 607 aaPredicted RBP12.94□□□□□ -0.34
DDR1-267ENST00000512336 CUL4AQ13619 759 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 SMAD1Q15797 465 aaKnown RBP12.94□□□□□ -0.34
DDR1-267ENST00000512336 FUT11Q495W5 492 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 L1TD1Q5T7N2 865 aaKnown RBP12.94□□□□□ -0.34
DDR1-267ENST00000512336 DYMQ7RTS9 669 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 ZNF605Q86T29 641 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 METTL3Q86U44 580 aaKnown RBP12.94□□□□□ -0.34
DDR1-267ENST00000512336 CADM4Q8NFZ8 388 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 OVCA2Q8WZ82 227 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 LARP4BQ92615 738 aaKnown RBP12.94□□□□□ -0.34
DDR1-267ENST00000512336 ZSCAN31Q96LW9 406 aaPredicted RBP12.94□□□□□ -0.34
DDR1-267ENST00000512336 ACCSQ96QU6 501 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 XPO6Q96QU8 1125 aaKnown RBP12.94□□□□□ -0.34
DDR1-267ENST00000512336 MMS19Q96T76 1030 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 BBS2Q9BXC9 721 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 ELOVL4Q9GZR5 314 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 SNX25Q9H3E2 840 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 DPEP3Q9H4B8 488 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 PCIF1Q9H4Z3 704 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 PRORYQ9H606 182 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 TBC1D7Q9P0N9 293 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 RAI2Q9Y5P3 530 aa12.94□□□□□ -0.34
DDR1-267ENST00000512336 METTL12A8MUP2 240 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 PLK4O00444 970 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 GFRA2O00451 464 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 TNFSF14O43557 240 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 RTN3O95197 1032 aaPredicted RBP12.93□□□□□ -0.34
DDR1-267ENST00000512336 PTPN1P18031 435 aaKnown RBP12.93□□□□□ -0.34
DDR1-267ENST00000512336 GRIN1Q05586 938 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 STARD3Q14849 445 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 PTPRNQ16849 979 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 DHRS13Q6UX07 377 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 TPGS1Q6ZTW0 290 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 ZNF843Q8N446 348 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 OR6B3Q8NGW1 331 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms