RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 OLFM3Q96PB7 478 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 BTBD9Q96Q07 612 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 BBS4Q96RK4 519 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 KCNK16Q96T55 309 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 GINS4Q9BRT9 223 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 SENP6Q9GZR1 1112 aaPredicted RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 NYAP2Q9P242 653 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 UXTQ9UBK9 157 aaPredicted RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 CTNNAL1Q9UBT7 734 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 KLHL20Q9Y2M5 609 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 IGSF9BQ9UPX0 1349 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 RGS5O15539 181 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 RAB14P61106 215 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 ATP2C1P98194 919 aaPredicted RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 KYNUQ16719 465 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 GALNTL6Q49A17 601 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 STYK1Q6J9G0 422 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 DENND1BQ6P3S1 775 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 CD302Q8IX05 232 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 DHX40Q8IX18 779 aaKnown RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 AGBL3Q8NEM8 1001 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 KCNV2Q8TDN2 545 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 ACSF2Q96CM8 615 aaPredicted RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 ERLEC1Q96DZ1 483 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 DTNBP1Q96EV8 351 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 MTG1Q9BT17 334 aaPredicted RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 VPS33BQ9H267 617 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 ELOVL6Q9H5J4 265 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 POLE3Q9NRF9 147 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 ABHD10Q9NUJ1 306 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 IL1RAPL1Q9NZN1 696 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 APEX2Q9UBZ4 518 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 MARCOQ9UEW3 520 aaPredicted RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 CHORDC1Q9UHD1 332 aaPredicted RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 ADAM21Q9UKJ8 722 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 CHMP2BQ9UQN3 213 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 GRID2IPA4D2P6 1211 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 ZNF839A8K0R7 811 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 SLC16A3O15427 465 aaKnown RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 EXTL3O43909 919 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 CYP2A7P20853 494 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 GTF2H1P32780 548 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 IL2P60568 153 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 PPP2R2AP63151 447 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 ZNF543Q08ER8 600 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 IKBKEQ14164 716 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 FUT11Q495W5 492 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 NT5DC3Q86UY8 548 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 GATAD2AQ86YP4 633 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.96□□□□□ -1.46
USP38-203ENST00000511739 NACC2Q96BF6 587 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 ADAM33Q9BZ11 813 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 RHBGQ9H310 441 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 ABCB6Q9NP58 842 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 SMPD4Q9NXE4 827 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 MTMR4Q9NYA4 1195 aa5.96□□□□□ -1.46
USP38-203ENST00000511739 RRP15Q9Y3B9 282 aaKnown RBP5.96□□□□□ -1.46
USP38-203ENST00000511739 LTN1O94822 1766 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 NPHP3-ACAD11A0A0J9YXS1 232 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 BIRC5O15392 142 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 PLA2G6O60733 806 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 POLR2EP19388 210 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 SP100P23497 879 aaPredicted RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 LHX1P48742 406 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CCT8P50990 548 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 RPS6P62753 249 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 STX4Q12846 297 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 PPIL2Q13356 520 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CDC42EP5Q6NZY7 148 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 FBXL19Q6PCT2 694 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 R3HCC1LQ7Z5L2 792 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 ADGRF2Q8IZF7 708 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 RNFT2Q96EX2 444 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 PPP1R16AQ96I34 528 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 ZNF333Q96JL9 665 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 RNPC3Q96LT9 517 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 MXRA8Q9BRK3 442 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 TARS2Q9BW92 718 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 PDGFCQ9NRA1 345 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 KCND2Q9NZV8 630 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 GRID1Q9ULK0 1009 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 RBM7Q9Y580 266 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 PCDHB5Q9Y5E4 795 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CARNS1A5YM72 827 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 SAC3D1A6NKF1 404 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 PP2D1A8MPX8 630 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 SPAG6O75602 509 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 HLA-DQA2P01906 255 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CYP2A6P11509 494 aaPredicted RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 MUTP22033 750 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 NUDT2P50583 147 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 RENBPP51606 427 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 PPP4CP60510 307 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 ACAP2Q15057 778 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CCNG2Q16589 344 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 INTS5Q6P9B9 1019 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 HHIPL2Q6UWX4 724 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 FAM20CQ8IXL6 584 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CENPLQ8N0S6 344 aaPredicted RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 ZKSCAN4Q969J2 545 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms