RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 IRF1P10914 325 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 BRD2P25440 801 aaKnown RBP12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 MTIF2P46199 727 aaKnown RBP12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 APBA1Q02410 837 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 CT47A1Q5JQC4 288 aaPredicted RBP12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 C10orf120Q5SQS8 335 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 GJB7Q6PEY0 223 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 TRIM65Q6PJ69 517 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 ZC3H14Q6PJT7 736 aaKnown RBP12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 GBP6Q6ZN66 633 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 BHLHA9Q7RTU4 235 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 BBS7Q8IWZ6 715 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 SLC35F5Q8WV83 523 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 KCTD13Q8WZ19 329 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 NDRG1Q92597 394 aaKnown RBP12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 OTUB2Q96DC9 234 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 ULBP1Q9BZM6 244 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 SEMA4AQ9H3S1 761 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 ZSCAN32Q9NX65 697 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 DNMT3LQ9UJW3 386 aa12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.21□□□□□ -0.45
SH3RF1-205ENST00000511421 FANCMQ8IYD8 2048 aa12.21□□□□□ -0.46
SH3RF1-205ENST00000511421 GOLGA6L22H0YM25 854 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 K7ESF4 209 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 LILRB5O75023 590 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 ZBED1O96006 694 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 RALAP11233 206 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 PON1P27169 355 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 STILQ15468 1287 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 MAN2A1Q16706 1144 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 EXOC3L4Q17RC7 722 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 MIIPQ5JXC2 388 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 LY6G5CQ5SRR4 150 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 FAM114A1Q8IWE2 563 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 EXOC4Q96A65 974 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 FAM126AQ9BYI3 521 aaPredicted RBP12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 LRRC4Q9HBW1 653 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 SAMSN1Q9NSI8 373 aaKnown RBP12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 PCDHGA2Q9Y5H1 932 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 MYO16Q9Y6X6 1858 aa12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 EP300Q09472 2414 aaPredicted RBP12.2□□□□□ -0.46
SH3RF1-205ENST00000511421 CHURC1-FNTBB4DL54 471 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 RNF40O75150 1001 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 ADH1CP00326 375 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 HOXC13P31276 330 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 SLC6A11P48066 632 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 YWHAGP61981 247 aaKnown RBP eCLIP12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 ADIGQ0VDE8 80 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 MESP2Q0VG99 397 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 FBXO43Q4G163 708 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 HSP90AA4PQ58FG1 418 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 PMF1Q6P1K2 205 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 ENOSF1Q7L5Y1 443 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 TADA2BQ86TJ2 420 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 C12orf40Q86WS4 652 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 SCML4Q8N228 414 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 ARHGAP18Q8N392 663 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 SECISBP2LQ93073 1101 aaKnown RBP12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 CDK5RAP1Q96SZ6 601 aaKnown RBP12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 SIX2Q9NPC8 291 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 APEX2Q9UBZ4 518 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 ATG2BQ96BY7 2078 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 MYOFQ9NZM1 2061 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 BECN2A8MW95 431 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 M0QYV0 167 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 ADH5P11766 374 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 KRT5P13647 590 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 EIF2DP41214 584 aaKnown RBP12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 RGS7P49802 495 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 MFAP3P55082 362 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 DMWDQ09019 674 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 PPP2R5DQ14738 602 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 VWA3BQ502W6 1294 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 DPY19L2P1Q6NXN4 242 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 Q6ZNB5 142 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 TMEM25Q86YD3 366 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 SUMF1Q8NBK3 374 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 ENOX1Q8TC92 643 aaKnown RBP12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 ATRIPQ8WXE1 791 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 FAM81BQ96LP2 452 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 TUBGCP2Q9BSJ2 902 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 NDST4Q9H3R1 872 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 ACP6Q9NPH0 428 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 SPHK2Q9NRA0 654 aa12.19□□□□□ -0.46
SH3RF1-205ENST00000511421 OTOGLQ3ZCN5 2332 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 ANTXRLA6NF34 631 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 YJEFN3A6XGL0 299 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 E7ENQ6 273 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 K7EQS6 105 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 HOXC11O43248 304 aaPredicted RBP12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 STC2O76061 302 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 LMNAP02545 664 aaKnown RBP12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 KLKB1P03952 638 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 CHRM1P11229 460 aaPredicted RBP12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 PRKCSHP14314 528 aaPredicted RBP12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 HOXA6P31267 233 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 GPD2P43304 727 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 RPL34P49207 117 aaKnown RBP12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 NRLP54845 237 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 DAOAP59103 153 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms