RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 GBX1Q14549 363 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 C9orf50Q5SZB4 431 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 TMEM63BQ5T3F8 832 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 DOK3Q7L591 496 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 ZNF589Q86UQ0 364 aaPredicted RBP8.58□□□□□ -1.04
LINC01088-207ENST00000511241 DENND1CQ8IV53 801 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 FUKQ8N0W3 1084 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 CAMKK1Q8N5S9 505 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 DEFB123Q8N688 67 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 IFI44Q8TCB0 444 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 RGMAQ96B86 450 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 TRIM43Q96BQ3 446 aaPredicted RBP8.58□□□□□ -1.04
LINC01088-207ENST00000511241 TMEM176AQ96HP8 235 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 DMRTA2Q96SC8 542 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 RBM15Q96T37 977 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC01088-207ENST00000511241 SLC38A10Q9HBR0 1119 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 HECAQ9UBI9 543 aaPredicted RBP8.58□□□□□ -1.04
LINC01088-207ENST00000511241 CLCA2Q9UQC9 943 aa8.58□□□□□ -1.04
LINC01088-207ENST00000511241 COL11A1P12107 1806 aaPredicted RBP8.58□□□□□ -1.04
LINC01088-207ENST00000511241 VCANP13611 3396 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 KBTBD13C9JR72 458 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 MFAP3LO75121 409 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 ZBED4O75132 1171 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 TTLL1O95922 423 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 ITGB3P05106 788 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 RARBP10826 455 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 ANP32AP39687 249 aaKnown RBP8.57□□□□□ -1.04
LINC01088-207ENST00000511241 LRIT3Q3SXY7 679 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 CCDC174Q6PII3 467 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 TTLL10Q6ZVT0 673 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 LIMS2Q7Z4I7 341 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 DGKHQ86XP1 1220 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 GMCL1P1Q8NEA9 526 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 STON2Q8WXE9 905 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 BADQ92934 168 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 ACO2Q99798 780 aaKnown RBP8.57□□□□□ -1.04
LINC01088-207ENST00000511241 NACAP1Q9BZK3 213 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 ZHX1Q9UKY1 873 aaPredicted RBP8.57□□□□□ -1.04
LINC01088-207ENST00000511241 PLIN4Q96Q06 1357 aa8.57□□□□□ -1.04
LINC01088-207ENST00000511241 SPTBN5Q9NRC6 3674 aaKnown RBP8.57□□□□□ -1.04
LINC01088-207ENST00000511241 ASTN1O14525 1302 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 SYNRGQ9UMZ2 1314 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 PATE3B3GLJ2 98 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 FOXS1O43638 330 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 RANBP6O60518 1105 aaKnown RBP8.56□□□□□ -1.04
LINC01088-207ENST00000511241 PQBP1O60828 265 aaKnown RBP8.56□□□□□ -1.04
LINC01088-207ENST00000511241 STC2O76061 302 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 IPO13O94829 963 aaKnown RBP8.56□□□□□ -1.04
LINC01088-207ENST00000511241 IGHDP01880 384 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 FTLP02792 175 aaPredicted RBP8.56□□□□□ -1.04
LINC01088-207ENST00000511241 PCSK1P29120 753 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 MSX2P35548 267 aaPredicted RBP8.56□□□□□ -1.04
LINC01088-207ENST00000511241 SLC16A2P36021 539 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 HK3P52790 923 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 HAND2P61296 217 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 FOXL1Q12952 345 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 HDAC1Q13547 482 aaPredicted RBP8.56□□□□□ -1.04
LINC01088-207ENST00000511241 SHHQ15465 462 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 NOL8Q76FK4 1167 aaKnown RBP8.56□□□□□ -1.04
LINC01088-207ENST00000511241 KRTAP19-1Q8IUB9 90 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 ANKRD35Q8N283 1001 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 D2HGDHQ8N465 521 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 CDK5RAP3Q96JB5 506 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 FAM167AQ96KS9 214 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 SAMD11Q96NU1 681 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 LBHD1Q9BQE6 289 aaPredicted RBP8.56□□□□□ -1.04
LINC01088-207ENST00000511241 KCNH6Q9H252 994 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 MTMR10Q9NXD2 777 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 FEM1BQ9UK73 627 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 STX8Q9UNK0 236 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 ACTL7AQ9Y615 435 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 SMCHD1A6NHR9 2005 aa8.56□□□□□ -1.04
LINC01088-207ENST00000511241 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.55□□□□□ -1.04
LINC01088-207ENST00000511241 TSPY2A6NKD2 308 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 TBKBP1A7MCY6 615 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 ATP2A1O14983 1001 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 PRC1O43663 620 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 FGAP02671 866 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 AKR1A1P14550 325 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 MAP2K6P52564 334 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 HHEXQ03014 270 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 TLE1Q04724 770 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 IKQ13123 557 aaPredicted RBP8.55□□□□□ -1.04
LINC01088-207ENST00000511241 FZD5Q13467 585 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 ACVR2BQ13705 512 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 KHDC1Q4VXA5 237 aaKnown RBP8.55□□□□□ -1.04
LINC01088-207ENST00000511241 AFMIDQ63HM1 303 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 SEM1Q6ZVN7 128 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 TBC1D10CQ8IV04 446 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 ZBTB34Q8NCN2 500 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 KLHDC9Q8NEP7 349 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 DNERQ8NFT8 737 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 FBXO18Q8NFZ0 1043 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 A1CFQ9NQ94 594 aaKnown RBP8.55□□□□□ -1.04
LINC01088-207ENST00000511241 RNF146Q9NTX7 359 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 CNOT11Q9UKZ1 510 aaKnown RBP8.55□□□□□ -1.04
LINC01088-207ENST00000511241 SH3BP1Q9Y3L3 701 aa8.55□□□□□ -1.04
LINC01088-207ENST00000511241 FRMPD2Q68DX3 1309 aaPredicted RBP8.54□□□□□ -1.04
LINC01088-207ENST00000511241 ZNFX1Q9P2E3 1918 aaKnown RBP8.54□□□□□ -1.04
LINC01088-207ENST00000511241 CXorf49A8MYA2 514 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms