RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 DENND1AQ8TEH3 1009 aa17.25■□□□□ 0.35
CLMAT3-201ENST00000510576 CLEC4CQ8WTT0 213 aa17.25■□□□□ 0.35
CLMAT3-201ENST00000510576 GRAMD1AQ96CP6 724 aa17.25■□□□□ 0.35
CLMAT3-201ENST00000510576 PAFAH2Q99487 392 aa17.25■□□□□ 0.35
CLMAT3-201ENST00000510576 DHRS4Q9BTZ2 278 aa17.25■□□□□ 0.35
CLMAT3-201ENST00000510576 AP5M1Q9H0R1 490 aa17.25■□□□□ 0.35
CLMAT3-201ENST00000510576 ARL2BPQ9Y2Y0 163 aa17.25■□□□□ 0.35
CLMAT3-201ENST00000510576 BCLAF3A2AJT9 711 aaKnown RBP17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 SPTLC1O15269 473 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 DNAJC8O75937 253 aaPredicted RBP17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 CA4P22748 312 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 LMO2P25791 158 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 FOXN2P32314 431 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 GBP2P32456 591 aaPredicted RBP17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 MSH2P43246 934 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 MTM1Q13496 603 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 XKR4Q5GH76 650 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 ARCQ7LC44 396 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 SSU72Q9NP77 194 aaKnown RBP17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 RAB6BQ9NRW1 208 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 A0A1W2PPM1 405 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 TFE3P19532 575 aaPredicted RBP17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 CYP2F1P24903 491 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 RBL1P28749 1068 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 ELK3P41970 407 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 RPL34P49207 117 aaKnown RBP17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 CRYBB1P53674 252 aaPredicted RBP17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 ZNF200P98182 395 aaPredicted RBP17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 MTFR1Q15390 333 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 CDKL3Q8IVW4 592 aaPredicted RBP17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 CENPIQ92674 756 aaPredicted RBP17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 TNIP3Q96KP6 325 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 KATNAL1Q9BW62 490 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 FRMD8Q9BZ67 464 aaPredicted RBP17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 NRDE2Q9H7Z3 1164 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 SLC40A1Q9NP59 571 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 ABCF3Q9NUQ8 709 aa17.24■□□□□ 0.35
CLMAT3-201ENST00000510576 C17orf102A2RUQ5 167 aa17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 HUS1O60921 280 aa17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 SPAG6O75602 509 aa17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 ZFXP17010 805 aaPredicted RBP17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 HNRNPH1P31943 449 aaKnown RBP17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 RPA3P35244 121 aaPredicted RBP17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 DPYSL2Q16555 572 aa17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 ADGRF2Q8IZF7 708 aa17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 SLC2A14Q8TDB8 520 aa17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 HSFY1Q96LI6 401 aa17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 CYTH2Q99418 400 aa17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 C11orf84Q9BUA3 381 aaPredicted RBP17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 KLC2Q9H0B6 622 aa17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 DHX35Q9H5Z1 703 aaKnown RBP17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 GOLGA2P5Q9HBQ8 144 aa17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 SLC12A4Q9UP95 1085 aa17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 IPPQ9Y573 584 aa17.23■□□□□ 0.35
CLMAT3-201ENST00000510576 TYROBPO43914 113 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 KRT4P19013 534 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 L1CAMP32004 1257 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 BEX3Q00994 111 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 SOX4Q06945 474 aaPredicted RBP17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 ZNF618Q5T7W0 954 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 HHATQ5VTY9 493 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 C4orf22Q6V702 233 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 LIMS2Q7Z4I7 341 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 DCAKDQ8WVC6 231 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 ADAM33Q9BZ11 813 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 PITPNM3Q9BZ71 974 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 AP4E1Q9UPM8 1137 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 TEX264Q9Y6I9 313 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 KBTBD13C9JR72 458 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 CAPN15O75808 1086 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 ZWINTO95229 277 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 WARSP23381 471 aaKnown RBP17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 YWHAGP61981 247 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 CCL14Q16627 93 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 FAM133BQ5BKY9 247 aaKnown RBP17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 SYCP2LQ5T4T6 812 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 CGB2Q6NT52 195 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 RGS9BPQ6ZS82 235 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 IGDCC3Q8IVU1 814 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 NME8Q8N427 588 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 ETNK2Q9NVF9 386 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 HAUS2Q9NVX0 235 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 PRKAG3Q9UGI9 489 aa17.22■□□□□ 0.35
CLMAT3-201ENST00000510576 XPO1O14980 1071 aaKnown RBP17.21■□□□□ 0.35
CLMAT3-201ENST00000510576 RASSF9O75901 435 aa17.21■□□□□ 0.35
CLMAT3-201ENST00000510576 MAP3K6O95382 1288 aa17.21■□□□□ 0.35
CLMAT3-201ENST00000510576 GNAT1P11488 350 aa17.21■□□□□ 0.35
CLMAT3-201ENST00000510576 ATXN1P54253 815 aaKnown RBP17.21■□□□□ 0.35
CLMAT3-201ENST00000510576 CBLBQ13191 982 aa17.21■□□□□ 0.35
CLMAT3-201ENST00000510576 XRCC4Q13426 336 aa17.21■□□□□ 0.35
CLMAT3-201ENST00000510576 SLC1A5Q15758 541 aa17.21■□□□□ 0.35
CLMAT3-201ENST00000510576 PDK4Q16654 411 aa17.21■□□□□ 0.35
CLMAT3-201ENST00000510576 EFHC1Q5JVL4 640 aa17.21■□□□□ 0.35
CLMAT3-201ENST00000510576 FAM47EQ6ZV65 393 aa17.21■□□□□ 0.35
CLMAT3-201ENST00000510576 TOP6BLQ8N6T0 577 aa17.21■□□□□ 0.35
CLMAT3-201ENST00000510576 GBP7Q8N8V2 638 aaPredicted RBP17.21■□□□□ 0.35
CLMAT3-201ENST00000510576 B3GALNT2Q8NCR0 500 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms