RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 PNPLA1Q8N8W4 532 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 FAM204AQ9H8W3 233 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 DKK4Q9UBT3 224 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 HDAC9Q9UKV0 1011 aa6.08□□□□□ -1.44
NUP54-209ENST00000510569 CD19P15391 556 aa6.07□□□□□ -1.44
NUP54-209ENST00000510569 ITGA8P53708 1063 aa6.07□□□□□ -1.44
NUP54-209ENST00000510569 CACNB3P54284 484 aa6.07□□□□□ -1.44
NUP54-209ENST00000510569 FMO1Q01740 532 aa6.07□□□□□ -1.44
NUP54-209ENST00000510569 USP49Q70CQ1 688 aa6.07□□□□□ -1.44
NUP54-209ENST00000510569 UBE2Q1Q7Z7E8 422 aa6.07□□□□□ -1.44
NUP54-209ENST00000510569 RAVER1Q8IY67 606 aaKnown RBP6.07□□□□□ -1.44
NUP54-209ENST00000510569 METTL25Q8N6Q8 603 aa6.07□□□□□ -1.44
NUP54-209ENST00000510569 C12orf76Q8N812 135 aaPredicted RBP6.07□□□□□ -1.44
NUP54-209ENST00000510569 NGDNQ8NEJ9 315 aaKnown RBP6.07□□□□□ -1.44
NUP54-209ENST00000510569 HIC2Q96JB3 615 aa6.07□□□□□ -1.44
NUP54-209ENST00000510569 NKX1-2Q9UD57 310 aaPredicted RBP6.07□□□□□ -1.44
NUP54-209ENST00000510569 VPS51Q9UID3 782 aa6.07□□□□□ -1.44
NUP54-209ENST00000510569 MID2Q9UJV3 735 aa6.07□□□□□ -1.44
NUP54-209ENST00000510569 ASAP1Q9ULH1 1129 aa6.07□□□□□ -1.44
NUP54-209ENST00000510569 SCGB1D2O95969 90 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 CTSAP10619 480 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 ADRA1DP25100 572 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 CCKBRP32239 447 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 RPS13P62277 151 aaKnown RBP6.06□□□□□ -1.44
NUP54-209ENST00000510569 GPC5P78333 572 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 DEUP1Q05D60 604 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 SLC14A1Q13336 389 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 CLCA4Q14CN2 919 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 MFSD13AQ14CX5 517 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 POLD3Q15054 466 aaPredicted RBP6.06□□□□□ -1.44
NUP54-209ENST00000510569 LEXMQ3ZCV2 418 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 YAF2Q8IY57 180 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 TCEAL8Q8IYN2 117 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 MAGEB6Q8N7X4 407 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 SMCR8Q8TEV9 937 aaPredicted RBP6.06□□□□□ -1.44
NUP54-209ENST00000510569 NSMCE1Q8WV22 266 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 LRTOMTQ8WZ04 291 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 ZDHHC12Q96GR4 267 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 APIPQ96GX9 242 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 MSLNLQ96KJ4 702 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 CHST8Q9H2A9 424 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 TMEM184CQ9NVA4 438 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 STEAP1Q9UHE8 339 aa6.06□□□□□ -1.44
NUP54-209ENST00000510569 NOB1Q9ULX3 412 aaKnown RBP6.06□□□□□ -1.44
NUP54-209ENST00000510569 RAB27BO00194 218 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 CLIC1O00299 241 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 INMTO95050 263 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 OAZ2O95190 189 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 HRGP04196 525 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 TPH1P17752 444 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 HSF1Q00613 529 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 NFE2Q16621 373 aaPredicted RBP6.05□□□□□ -1.44
NUP54-209ENST00000510569 MZT2AQ6P582 158 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 SESTD1Q86VW0 696 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 FAM177A1Q8N128 213 aaPredicted RBP6.05□□□□□ -1.44
NUP54-209ENST00000510569 LRRC27Q9C0I9 530 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 HEY2Q9UBP5 337 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 DNAJB11Q9UBS4 358 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 FZD4Q9ULV1 537 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 CAPN11Q9UMQ6 739 aa6.05□□□□□ -1.44
NUP54-209ENST00000510569 TOMM40O96008 361 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 MYF5P13349 255 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 ZKSCAN1P17029 563 aaPredicted RBP6.04□□□□□ -1.44
NUP54-209ENST00000510569 RBL1P28749 1068 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 COPAP53621 1224 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 YPEL5P62699 121 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 STK3Q13188 491 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 CC2D1BQ5T0F9 858 aaKnown RBP6.04□□□□□ -1.44
NUP54-209ENST00000510569 PLAG1Q6DJT9 500 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 ANKRD13BQ86YJ7 626 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 WASF1Q92558 559 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 ZFYVE19Q96K21 471 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 SELENOOQ9BVL4 669 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 ZCWPW1Q9H0M4 648 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 FOXP1Q9H334 677 aaPredicted RBP6.04□□□□□ -1.44
NUP54-209ENST00000510569 SEMA5BQ9P283 1151 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 ZNF580Q9UK33 172 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 OGDHLQ9ULD0 1010 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 COL15A1P39059 1388 aa6.04□□□□□ -1.44
NUP54-209ENST00000510569 CYP19A1P11511 503 aaPredicted RBP6.03□□□□□ -1.44
NUP54-209ENST00000510569 BTF3P20290 206 aaKnown RBP6.03□□□□□ -1.44
NUP54-209ENST00000510569 SCP2P22307 547 aa6.03□□□□□ -1.44
NUP54-209ENST00000510569 TACR3P29371 465 aa6.03□□□□□ -1.44
NUP54-209ENST00000510569 TXNL4AP83876 142 aaKnown RBP6.03□□□□□ -1.44
NUP54-209ENST00000510569 SLC9C1Q4G0N8 1177 aa6.03□□□□□ -1.44
NUP54-209ENST00000510569 KLHL22Q53GT1 634 aa6.03□□□□□ -1.44
NUP54-209ENST00000510569 RNF220Q5VTB9 566 aa6.03□□□□□ -1.44
NUP54-209ENST00000510569 ARFGAP1Q8N6T3 406 aa6.03□□□□□ -1.44
NUP54-209ENST00000510569 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.03□□□□□ -1.44
NUP54-209ENST00000510569 C11orf44Q8N8P7 122 aa6.03□□□□□ -1.44
NUP54-209ENST00000510569 WIPF2Q8TF74 440 aaPredicted RBP6.03□□□□□ -1.44
NUP54-209ENST00000510569 VPS50Q96JG6 964 aa6.03□□□□□ -1.44
NUP54-209ENST00000510569 HIST1H2AAQ96QV6 131 aa6.03□□□□□ -1.44
NUP54-209ENST00000510569 ADGRE3Q9BY15 652 aa6.03□□□□□ -1.44
NUP54-209ENST00000510569 SLC27A6Q9Y2P4 619 aa6.03□□□□□ -1.44
NUP54-209ENST00000510569 SPATA31A1Q5TZJ5 1347 aa6.02□□□□□ -1.45
NUP54-209ENST00000510569 FYB1O15117 783 aa6.02□□□□□ -1.45
NUP54-209ENST00000510569 PRAMEF2O60811 474 aa6.02□□□□□ -1.45
NUP54-209ENST00000510569 ZBED1O96006 694 aa6.02□□□□□ -1.45
NUP54-209ENST00000510569 TKTP29401 623 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms