RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 OVCA2Q8WZ82 227 aa14.17□□□□□ -0.14
DDX41-210ENST00000509576 DUSP9Q99956 384 aaKnown RBP14.17□□□□□ -0.14
DDX41-210ENST00000509576 KCTD10Q9H3F6 313 aa14.17□□□□□ -0.14
DDX41-210ENST00000509576 CUEDC2Q9H467 287 aa14.17□□□□□ -0.14
DDX41-210ENST00000509576 ZSCAN16Q9H4T2 348 aaPredicted RBP14.17□□□□□ -0.14
DDX41-210ENST00000509576 CSNK1G1Q9HCP0 422 aa14.17□□□□□ -0.14
DDX41-210ENST00000509576 NUDT5Q9UKK9 219 aa14.17□□□□□ -0.14
DDX41-210ENST00000509576 KLK13Q9UKR3 277 aa14.17□□□□□ -0.14
DDX41-210ENST00000509576 ATRXP46100 2492 aa14.17□□□□□ -0.14
DDX41-210ENST00000509576 SMG1Q96Q15 3661 aaKnown RBP14.16□□□□□ -0.14
DDX41-210ENST00000509576 WASH3PC4AMC7 463 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 AP1G2O75843 785 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 RTN3O95197 1032 aaPredicted RBP14.16□□□□□ -0.14
DDX41-210ENST00000509576 CISD3P0C7P0 127 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 NDUFV2P19404 249 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 ATICP31939 592 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 AFMP43652 599 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 ASPAP45381 313 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 TUBP50607 506 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 NDST1P52848 882 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 GAD2Q05329 585 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 NCOA4Q13772 614 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 KNOP1Q1ED39 458 aaKnown RBP14.16□□□□□ -0.14
DDX41-210ENST00000509576 ZNF699Q32M78 642 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 HSF5Q4G112 596 aaPredicted RBP14.16□□□□□ -0.14
DDX41-210ENST00000509576 EOGTQ5NDL2 527 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 C10orf76Q5T2E6 689 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 STXBP4Q6ZWJ1 553 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 LPCAT2Q7L5N7 544 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 C11orf74Q86VG3 221 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 SLC2A14Q8TDB8 520 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 UPF2Q9HAU5 1272 aaKnown RBP14.16□□□□□ -0.14
DDX41-210ENST00000509576 APOBEC3GQ9HC16 384 aaKnown RBP14.16□□□□□ -0.14
DDX41-210ENST00000509576 DMAP1Q9NPF5 467 aaPredicted RBP14.16□□□□□ -0.14
DDX41-210ENST00000509576 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.16□□□□□ -0.148e-9■■■■■ 103.2
DDX41-210ENST00000509576 FAM49BQ9NUQ9 324 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 TBC1D14Q9P2M4 693 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 CIZ1Q9ULV3 898 aaPredicted RBP14.16□□□□□ -0.14
DDX41-210ENST00000509576 PCDHA7Q9UN72 937 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 RAD54BQ9Y620 910 aa14.16□□□□□ -0.14
DDX41-210ENST00000509576 ANKRD11Q6UB99 2663 aaPredicted RBP14.16□□□□□ -0.14
DDX41-210ENST00000509576 ADAMTS20P59510 1910 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 TBC1D3BA6NDS4 549 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 TAF4O00268 1085 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 CYP26A1O43174 497 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 ACTN4O43707 911 aaKnown RBP14.15□□□□□ -0.14
DDX41-210ENST00000509576 CACNG3O60359 315 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 TLR5O60602 858 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 GJB3O75712 270 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 YEATS4O95619 227 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 CD59P13987 128 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 MAP3K7CLP57077 242 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 TRPC3Q13507 836 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 ZACNQ401N2 412 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 RESP18Q5W5W9 173 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 LYSMD4Q5XG99 296 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 CLEC20AQ6ZU45 233 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 HTR3DQ70Z44 454 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 SCD5Q86SK9 330 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 DDX42Q86XP3 938 aaKnown RBP eCLIP14.15□□□□□ -0.14
DDX41-210ENST00000509576 CRYBG2Q8N1P7 616 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 IQUBQ8NA54 791 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 PDZD8Q8NEN9 1154 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 SYAP1Q96A49 352 aaPredicted RBP14.15□□□□□ -0.14
DDX41-210ENST00000509576 OTUB2Q96DC9 234 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 SMARCD1Q96GM5 515 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 MED10Q9BTT4 135 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 POLMQ9NP87 494 aaPredicted RBP14.15□□□□□ -0.14
DDX41-210ENST00000509576 EHD2Q9NZN4 543 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 BCCIPQ9P287 314 aaKnown RBP eCLIP14.15□□□□□ -0.14
DDX41-210ENST00000509576 SERTAD1Q9UHV2 236 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 STARD13Q9Y3M8 1113 aa14.15□□□□□ -0.14
DDX41-210ENST00000509576 R3HCC1Q9Y3T6 440 aaKnown RBP14.15□□□□□ -0.14
DDX41-210ENST00000509576 SRRM3A6NNA2 597 aaPredicted RBP14.14□□□□□ -0.15
DDX41-210ENST00000509576 K7ELQ4 463 aaPredicted RBP14.14□□□□□ -0.15
DDX41-210ENST00000509576 EXOC3O60645 756 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 ALDH1A2O94788 518 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 ASS1P00966 412 aaKnown RBP14.14□□□□□ -0.15
DDX41-210ENST00000509576 KLKB1P03952 638 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 HOXB2P14652 356 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 SNRPFP62306 86 aaKnown RBP14.14□□□□□ -0.15
DDX41-210ENST00000509576 BIRC3Q13489 604 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 ANO4Q32M45 955 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 ZNF667Q5HYK9 610 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 Q6ZNB5 142 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 SV2AQ7L0J3 742 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 CCDC26Q8TAB7 109 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 CAMK1GQ96NX5 476 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 GABRG3Q99928 467 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 CYLDQ9NQC7 956 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 DNAJC17Q9NVM6 304 aaKnown RBP14.14□□□□□ -0.15
DDX41-210ENST00000509576 CACNA2D2Q9NY47 1150 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 MARK1Q9P0L2 795 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 DEC1Q9P2X7 70 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 CLEC4EQ9ULY5 219 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 SH3BP1Q9Y3L3 701 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 CABIN1Q9Y6J0 2220 aa14.14□□□□□ -0.15
DDX41-210ENST00000509576 PVALEFA0A1B0GWK0 134 aa14.13□□□□□ -0.15
DDX41-210ENST00000509576 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.13□□□□□ -0.15
DDX41-210ENST00000509576 NEDD8-MDP1E9PL57 170 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms