RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 PNKPQ96T60 521 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 SLC9A7Q96T83 725 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 SEPT5Q99719 369 aaPredicted RBP13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 MTIF3Q9H2K0 278 aaKnown RBP13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 ARFGAP3Q9NP61 516 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 NR2E1Q9Y466 385 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 INSL6Q9Y581 213 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 PCDHB12Q9Y5F1 795 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 SLC4A7Q9Y6M7 1214 aa13.16□□□□□ -0.3
LYSMD3-204ENST00000509384 hCG_1818297A0A087WSY0 165 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 C3orf70A6NLC5 250 aaPredicted RBP13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 RAD51CO43502 376 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 TJP3O95049 919 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 HAPLN1P10915 354 aaPredicted RBP13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 NCAM1P13591 858 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 RPL17P18621 184 aaKnown RBP13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 KDELR1P24390 212 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 RDXP35241 583 aaKnown RBP13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 CDKN2BP42772 138 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 MRPS25P82663 173 aaKnown RBP13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 ROR1Q01973 937 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 DMTNQ08495 405 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 SIX1Q15475 284 aaPredicted RBP13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 TFDP3Q5H9I0 405 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 SDHAF4Q5VUM1 108 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 SYPL2Q5VXT5 272 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 KAZNQ674X7 775 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 ANKS1BQ7Z6G8 1248 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 HERC6Q8IVU3 1022 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 NUP93Q8N1F7 819 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 CMASQ8NFW8 434 aaPredicted RBP13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 CCDC26Q8TAB7 109 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 SLC7A14Q8TBB6 771 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 NT5C3BQ969T7 300 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 MAGOHBQ96A72 148 aaKnown RBP13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 NPY6RQ99463 290 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 LBHD1Q9BQE6 289 aaPredicted RBP13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 HERPUD2Q9BSE4 406 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 SNRNP25Q9BV90 132 aaKnown RBP13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 ADAM33Q9BZ11 813 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 FBXO44Q9H4M3 255 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 RRN3Q9NYV6 651 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 STK39Q9UEW8 545 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 NAALADL1Q9UQQ1 740 aa13.15□□□□□ -0.3
LYSMD3-204ENST00000509384 SYNJ2BP-COX16A0A087WUM0 186 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 WDR27A2RRH5 827 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 SPDYE4A6NLX3 237 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 M0QYT0 321 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 MDM4O15151 490 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 ADAM12O43184 909 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 FYNP06241 537 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 KRT10P13645 584 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 ATP2A2P16615 1042 aaKnown RBP13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 CHRNA3P32297 505 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 OR1D2P34982 312 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 ATXN1P54253 815 aaKnown RBP13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 CDH6P55285 790 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 YWHAGP61981 247 aaKnown RBP eCLIP13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 PITX1P78337 314 aaPredicted RBP13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 SLC7A5Q01650 507 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 KRT17Q04695 432 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 DEUP1Q05D60 604 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 KLF1Q13351 362 aaPredicted RBP13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 KRT81Q14533 505 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 CYP1B1Q16678 543 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 OTUD1Q5VV17 481 aaPredicted RBP13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 BSPRYQ5W0U4 402 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 MAATS1Q7Z4T9 603 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 MAP7D3Q8IWC1 876 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 ZDHHC14Q8IZN3 488 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 VPS52Q8N1B4 723 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 C12orf50Q8NA57 414 aaPredicted RBP13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 PHOSPHO2Q8TCD6 241 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 HDAC7Q8WUI4 952 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 EDEM1Q92611 657 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 RUBCNQ92622 972 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 RUNDC3BQ96NL0 473 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 RAD9AQ99638 391 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 CALN1Q9BXU9 219 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 CRISPLD1Q9H336 500 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 COX16Q9P0S2 106 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 STIM2Q9P246 746 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 AMACRQ9UHK6 382 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 RAB21Q9UL25 225 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 SLC27A5Q9Y2P5 690 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 VWA8A3KMH1 1905 aa13.14□□□□□ -0.31
LYSMD3-204ENST00000509384 TLL1O43897 1013 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 SOAT2O75908 522 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 FGF18O76093 207 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 ENDOD1O94919 500 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 HEXIM1O94992 359 aaKnown RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 VNN2O95498 520 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 CD48P09326 243 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 FNTAP49354 379 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 VSNL1P62760 191 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 RPL10AP62906 217 aaKnown RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 DUSP4Q13115 394 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 NME3Q13232 169 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms