RNA–Protein interactions for RNA: ENST00000508869.5

TMCC1-208, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

TSL 3

Gene TMCC1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-208ENST00000508869 TUBB3Q13509 450 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 RBM20Q5T481 1227 aaKnown RBP4.8□□□□□ -1.64
TMCC1-208ENST00000508869 PPP1R32Q7Z5V6 425 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 TTC5Q8N0Z6 440 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 ZNF384Q8TF68 577 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 NT5C1BQ96P26 610 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 MAP3K14Q99558 947 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 TTYH3Q9C0H2 523 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 SERHLQ9NQF3 203 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 ANLNQ9NQW6 1124 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 SEMA4GQ9NTN9 838 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 DKK3Q9UBP4 350 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 NIP7Q9Y221 180 aaKnown RBP eCLIP4.8□□□□□ -1.64
TMCC1-208ENST00000508869 RAD54BQ9Y620 910 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 A0A0C4DFX4 3053 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 OTOFQ9HC10 1997 aa4.8□□□□□ -1.64
TMCC1-208ENST00000508869 RTL9Q8NET4 1388 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 ECM29Q5VYK3 1845 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 ABCC4O15439 1325 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 A0A1B0GUL6 1792 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 VCANP13611 3396 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 WDR27A2RRH5 827 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 LINC00473A8K010 186 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 MASP2O00187 686 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 DCLK1O15075 740 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 OFD1O75665 1012 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 HMGB1P09429 215 aaKnown RBP4.79□□□□□ -1.64
TMCC1-208ENST00000508869 HSPA5P11021 654 aaKnown RBP4.79□□□□□ -1.64
TMCC1-208ENST00000508869 ZNF37AP17032 561 aaPredicted RBP4.79□□□□□ -1.64
TMCC1-208ENST00000508869 NCLP19338 710 aaKnown RBP4.79□□□□□ -1.64
TMCC1-208ENST00000508869 GRIA3P42263 894 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 GCLCP48506 637 aaPredicted RBP4.79□□□□□ -1.64
TMCC1-208ENST00000508869 ZNF134P52741 427 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 SP2Q02086 613 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 PTPRRQ15256 657 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 AKNAD1Q5T1N1 836 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 TSTD2Q5T7W7 516 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 ZNF34Q8IZ26 560 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.79□□□□□ -1.64
TMCC1-208ENST00000508869 KLHDC4Q8TBB5 520 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 DIS3LQ8TF46 1054 aaKnown RBP4.79□□□□□ -1.64
TMCC1-208ENST00000508869 JDP2Q8WYK2 163 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 PGBD1Q96JS3 809 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 SLC46A1Q96NT5 459 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 NUP88Q99567 741 aaPredicted RBP4.79□□□□□ -1.64
TMCC1-208ENST00000508869 ACO2Q99798 780 aaKnown RBP4.79□□□□□ -1.64
TMCC1-208ENST00000508869 ACTRT3Q9BYD9 372 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 TPSD1Q9BZJ3 242 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 RNF186Q9NXI6 227 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 ZIM2Q9NZV7 527 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 CPA4Q9UI42 421 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 ATP6V0A2Q9Y487 856 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 UNC80Q8N2C7 3258 aa4.79□□□□□ -1.64
TMCC1-208ENST00000508869 SPTBN5Q9NRC6 3674 aaKnown RBP4.79□□□□□ -1.64
TMCC1-208ENST00000508869 MAP3K15Q6ZN16 1313 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 FNDC1Q4ZHG4 1894 aaPredicted RBP4.78□□□□□ -1.64
TMCC1-208ENST00000508869 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 ERVV-1B6SEH8 477 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 PPM1DO15297 605 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 PRPF3O43395 683 aaKnown RBP4.78□□□□□ -1.64
TMCC1-208ENST00000508869 UNC5CO95185 931 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 CHEK2O96017 543 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 ERBB2P04626 1255 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 GNAI2P04899 355 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 NR2F6P10588 404 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 VCAM1P19320 739 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 TEFQ10587 303 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 TCF15Q12870 199 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 EIF2B5Q13144 721 aaKnown RBP4.78□□□□□ -1.64
TMCC1-208ENST00000508869 GRM1Q13255 1194 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 LRRC41Q15345 812 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 KHDC1LQ5JSQ8 128 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 SUSD4Q5VX71 490 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 B3GNT9Q6UX72 402 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 TMEM108Q6UXF1 575 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 RASAL3Q86YV0 1011 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 CAMKK1Q8N5S9 505 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 BRIX1Q8TDN6 353 aaKnown RBP4.78□□□□□ -1.64
TMCC1-208ENST00000508869 C1GALT1C1Q96EU7 318 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 VPS33BQ9H267 617 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 CPNE5Q9HCH3 593 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 NOB1Q9ULX3 412 aaKnown RBP4.78□□□□□ -1.64
TMCC1-208ENST00000508869 STXBP5LQ9Y2K9 1186 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.78□□□□□ -1.64
TMCC1-208ENST00000508869 ZSWIM8A7E2V4 1837 aa4.78□□□□□ -1.64
TMCC1-208ENST00000508869 ASTN2O75129 1339 aaPredicted RBP4.77□□□□□ -1.65
TMCC1-208ENST00000508869 SPEF2Q9C093 1822 aa4.77□□□□□ -1.65
TMCC1-208ENST00000508869 PPIP5K2O43314 1243 aa4.77□□□□□ -1.65
TMCC1-208ENST00000508869 TRIAP1O43715 76 aa4.77□□□□□ -1.65
TMCC1-208ENST00000508869 UBXN7O94888 489 aa4.77□□□□□ -1.65
TMCC1-208ENST00000508869 PIM1P11309 404 aaPredicted RBP4.77□□□□□ -1.65
TMCC1-208ENST00000508869 ITGALP20701 1170 aa4.77□□□□□ -1.65
TMCC1-208ENST00000508869 IL12RB1P42701 662 aa4.77□□□□□ -1.65
TMCC1-208ENST00000508869 KCNJ5P48544 419 aa4.77□□□□□ -1.65
TMCC1-208ENST00000508869 HUNKP57058 714 aa4.77□□□□□ -1.65
TMCC1-208ENST00000508869 ITIH3Q06033 890 aa4.77□□□□□ -1.65
TMCC1-208ENST00000508869 CCDC142Q17RM4 750 aa4.77□□□□□ -1.65
TMCC1-208ENST00000508869 SLC10A5Q5PT55 438 aa4.77□□□□□ -1.65
TMCC1-208ENST00000508869 FAM160B1Q5W0V3 765 aa4.77□□□□□ -1.65
TMCC1-208ENST00000508869 RGMBQ6NW40 437 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms