RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 C12orf29Q8N999 325 aa14.34□□□□□ -0.11
CCHCR1-227ENST00000508852 TAS1R2Q8TE23 839 aa14.34□□□□□ -0.11
CCHCR1-227ENST00000508852 KLF16Q9BXK1 252 aaPredicted RBP14.34□□□□□ -0.11
CCHCR1-227ENST00000508852 DUSP16Q9BY84 665 aa14.34□□□□□ -0.11
CCHCR1-227ENST00000508852 DCLK3Q9C098 648 aa14.34□□□□□ -0.11
CCHCR1-227ENST00000508852 RAB20Q9NX57 234 aa14.34□□□□□ -0.11
CCHCR1-227ENST00000508852 CLIC5Q9NZA1 410 aa14.34□□□□□ -0.11
CCHCR1-227ENST00000508852 MAPK8IP1Q9UQF2 711 aa14.34□□□□□ -0.11
CCHCR1-227ENST00000508852 STARD13Q9Y3M8 1113 aa14.34□□□□□ -0.11
CCHCR1-227ENST00000508852 BCLAF3A2AJT9 711 aaKnown RBP14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 BEST1O76090 585 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 KLF8O95600 359 aaPredicted RBP14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 CAVIN2O95810 425 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 TRIM49P0CI25 452 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 TRIM49CP0CI26 452 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 KIR2DL1P43626 348 aaPredicted RBP14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 SLC6A11P48066 632 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 COG7P83436 770 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 FKBP3Q00688 224 aaKnown RBP14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 STIM1Q13586 685 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 PPM1JQ5JR12 505 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 ZNF658Q5TYW1 1059 aaPredicted RBP14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 PMS2CLQ68D20 193 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 ANO7Q6IWH7 933 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 BBS7Q8IWZ6 715 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 ETFBKMTQ8IXQ9 262 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 TERB1Q8NA31 727 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 IL17RCQ8NAC3 791 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 TXNDC5Q8NBS9 432 aaKnown RBP14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 HEXIM2Q96MH2 286 aaKnown RBP14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 APOBEC3GQ9HC16 384 aaKnown RBP14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 MARK1Q9P0L2 795 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 BCCIPQ9P287 314 aaKnown RBP eCLIP14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 HMGXB4Q9UGU5 601 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 PLXND1Q9Y4D7 1925 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 THADAQ6YHU6 1953 aa14.33□□□□□ -0.12
CCHCR1-227ENST00000508852 NUP205Q92621 2012 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 HHLA1C9JL84 531 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 NPC1O15118 1278 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 MAP3K13O43283 966 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 TULP3O75386 442 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 ADRB1P08588 477 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 RARGP13631 454 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 CD58P19256 250 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 TIE1P35590 1138 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 CHKAP35790 457 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 KIF11P52732 1056 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 CREB5Q02930 508 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 LRRC63Q05C16 580 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 ORC1Q13415 861 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 GRAMD4Q6IC98 578 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 LPCAT2Q7L5N7 544 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 CCDC33Q8N5R6 958 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 ALLCQ8N6M5 410 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 ZNF513Q8N8E2 541 aaPredicted RBP14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 OLIG1Q8TAK6 271 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 TMEM176AQ96HP8 235 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 TIGD1Q96MW7 591 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 GOLPH3LQ9H4A5 285 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 MMRN2Q9H8L6 949 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 METTL14Q9HCE5 456 aaKnown RBP14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 NAGPAQ9UK23 515 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 KIAA1257Q9ULG3 409 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 USP3Q9Y6I4 520 aa14.32□□□□□ -0.12
CCHCR1-227ENST00000508852 SDK1Q7Z5N4 2213 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 KHNYNO15037 678 aaKnown RBP14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 CACNG3O60359 315 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 IRF1P10914 325 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 NTSR1P30989 418 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 HOXD12P35452 270 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 ZNF132P52740 706 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 KDSRQ06136 332 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 CETN1Q12798 172 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 SF3A2Q15428 464 aaKnown RBP14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 C10orf120Q5SQS8 335 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 C10orf76Q5T2E6 689 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 STPG1Q5TH74 334 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 DAB2IPQ5VWQ8 1189 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 RNF43Q68DV7 783 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 ARHGAP17Q68EM7 881 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 SLC36A4Q6YBV0 504 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 CYP2U1Q7Z449 544 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 RABEPKQ7Z6M1 372 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 TMEM25Q86YD3 366 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 ELOA2Q8IYF1 753 aaPredicted RBP14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 FMR1NBQ8N0W7 255 aaPredicted RBP14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 PHTF2Q8N3S3 785 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 MDGA1Q8NFP4 955 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 SMARCE1Q969G3 411 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 TWNKQ96RR1 684 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 BBS2Q9BXC9 721 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 CISHQ9NSE2 258 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 STRIP2Q9ULQ0 834 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 NCOR2Q9Y618 2525 aa14.31□□□□□ -0.12
CCHCR1-227ENST00000508852 MYO18AQ92614 2054 aaKnown RBP14.3□□□□□ -0.12
CCHCR1-227ENST00000508852 A0A1W2PQH9 124 aa14.3□□□□□ -0.12
CCHCR1-227ENST00000508852 SGK1O00141 431 aa14.3□□□□□ -0.12
CCHCR1-227ENST00000508852 GFRA2O00451 464 aa14.3□□□□□ -0.12
CCHCR1-227ENST00000508852 PSMA7O14818 248 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms