RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 NETO1Q8TDF5 533 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 ACDQ96AP0 544 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 P2RY11Q96G91 374 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 ZC3H10Q96K80 434 aaKnown RBP17.11■□□□□ 0.33
LMNA-222ENST00000508500 DUSP16Q9BY84 665 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 DUSP15Q9H1R2 295 aaPredicted RBP17.11■□□□□ 0.33
LMNA-222ENST00000508500 ARRDC1-AS1Q9H2J1 176 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 TLR8Q9NR97 1041 aaKnown RBP17.11■□□□□ 0.33
LMNA-222ENST00000508500 CISHQ9NSE2 258 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.11■□□□□ 0.33
LMNA-222ENST00000508500 HCN2Q9UL51 889 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 COQ4Q9Y3A0 265 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 SH3BP1Q9Y3L3 701 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 USP3Q9Y6I4 520 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 CHD8Q9HCK8 2581 aa17.11■□□□□ 0.33
LMNA-222ENST00000508500 TRIM24O15164 1050 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 EPN2O95208 641 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 KAT7O95251 611 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 APBB3O95704 486 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 ADH1CP00326 375 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 ADRB1P08588 477 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 CCDC192P0DO97 292 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 EPB41P11171 864 aaKnown RBP17.1■□□□□ 0.33
LMNA-222ENST00000508500 CD44P16070 742 aaKnown RBP17.1■□□□□ 0.33
LMNA-222ENST00000508500 KDSRQ06136 332 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 PLK5Q496M5 336 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 ISM2Q6H9L7 571 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 HTR3DQ70Z44 454 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 RASSF3Q86WH2 238 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 IL17RCQ8NAC3 791 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 OTUB2Q96DC9 234 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 FAXDC2Q96IV6 333 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 TIGD1Q96MW7 591 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 PNPLA8Q9NP80 782 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 SPHK2Q9NRA0 654 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 RMND1Q9NWS8 449 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 MMP17Q9ULZ9 603 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 USP24Q9UPU5 2620 aa17.1■□□□□ 0.33
LMNA-222ENST00000508500 SGK1O00141 431 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 HOXC11O43248 304 aaPredicted RBP17.09■□□□□ 0.33
LMNA-222ENST00000508500 TULP3O75386 442 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 RARGP13631 454 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 BMP6P22004 513 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 TIE1P35590 1138 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 ATP5C1P36542 298 aaKnown RBP17.09■□□□□ 0.33
LMNA-222ENST00000508500 MRPS21P82921 87 aaKnown RBP17.09■□□□□ 0.33
LMNA-222ENST00000508500 GAD2Q05329 585 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 SF3A2Q15428 464 aaKnown RBP17.09■□□□□ 0.33
LMNA-222ENST00000508500 CRY1Q16526 586 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 ALLCQ8N6M5 410 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 SMARCE1Q969G3 411 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 SLC35C1Q96A29 364 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 TMEM176AQ96HP8 235 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 LOXL4Q96JB6 756 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 HEXIM2Q96MH2 286 aaKnown RBP17.09■□□□□ 0.33
LMNA-222ENST00000508500 TPSD1Q9BZJ3 242 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 ARHGEF4Q9NR80 690 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 RXFP3Q9NSD7 469 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 INVSQ9Y283 1065 aa17.09■□□□□ 0.33
LMNA-222ENST00000508500 ADAMTS9Q9P2N4 1935 aa17.08■□□□□ 0.33
LMNA-222ENST00000508500 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.08■□□□□ 0.32
LMNA-222ENST00000508500 GOLGA6L4A6NEF3 574 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 TM4SF5O14894 197 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 SLC16A3O15427 465 aaKnown RBP17.08■□□□□ 0.32
LMNA-222ENST00000508500 ADAM23O75077 832 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 KRT37O76014 449 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 APODP05090 189 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 GRIA2P42262 883 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 DGKEP52429 567 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 FKBP3Q00688 224 aaKnown RBP17.08■□□□□ 0.32
LMNA-222ENST00000508500 DCAF17Q5H9S7 520 aaPredicted RBP17.08■□□□□ 0.32
LMNA-222ENST00000508500 PLA2G2CQ5R387 149 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 TCERG1LQ5VWI1 586 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 ARHGAP17Q68EM7 881 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 CCDC186Q7Z3E2 898 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 TTC30AQ86WT1 665 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 UBR7Q8N806 425 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 TXNDC5Q8NBS9 432 aaKnown RBP17.08■□□□□ 0.32
LMNA-222ENST00000508500 CCDC150Q8NCX0 1101 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 MDGA1Q8NFP4 955 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 TSTD1Q8NFU3 115 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 CCDC34Q96HJ3 373 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 NACA2Q9H009 215 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 SMOC1Q9H4F8 434 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 MAN1B1Q9UKM7 699 aa17.08■□□□□ 0.32
LMNA-222ENST00000508500 TULP2O00295 520 aa17.07■□□□□ 0.32
LMNA-222ENST00000508500 GADD45BO75293 160 aaPredicted RBP17.07■□□□□ 0.32
LMNA-222ENST00000508500 SMC2O95347 1197 aa17.07■□□□□ 0.32
LMNA-222ENST00000508500 KLF8O95600 359 aaPredicted RBP17.07■□□□□ 0.32
LMNA-222ENST00000508500 ZNF806P0C7X5 589 aa17.07■□□□□ 0.32
LMNA-222ENST00000508500 TNFRSF4P43489 277 aa17.07■□□□□ 0.32
LMNA-222ENST00000508500 ANO4Q32M45 955 aa17.07■□□□□ 0.32
LMNA-222ENST00000508500 RAB41Q5JT25 222 aa17.07■□□□□ 0.32
LMNA-222ENST00000508500 ANO7Q6IWH7 933 aa17.07■□□□□ 0.32
LMNA-222ENST00000508500 KLHDC10Q6PID8 442 aa17.07■□□□□ 0.32
LMNA-222ENST00000508500 Q6ZNB5 142 aa17.07■□□□□ 0.32
LMNA-222ENST00000508500 PIGZQ86VD9 579 aa17.07■□□□□ 0.32
LMNA-222ENST00000508500 ZNF276Q8N554 614 aa17.07■□□□□ 0.32
LMNA-222ENST00000508500 TSG101Q99816 390 aa17.07■□□□□ 0.32
LMNA-222ENST00000508500 PPP1R3GB7ZBB8 358 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms