RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 KLHL3Q9UH77 587 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PCDHGB4Q9UN71 923 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 YBX2Q9Y2T7 364 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 NLRC5Q86WI3 1866 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CASQ2O14958 399 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SYN3O14994 580 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 MCF2LO15068 1137 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PRPF4O43172 522 aaKnown RBP eCLIP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SLC37A4O43826 429 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 MTRF1O75570 445 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 KLF8O95600 359 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CHRNA1P02708 482 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PCCBP05166 539 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 AKT1P31749 480 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SCNN1BP51168 640 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 NPEPPSP55786 919 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 STX1BP61266 288 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 DNM1Q05193 864 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ZNF235Q14590 738 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 DBN1Q16643 649 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 IMPG1Q17R60 797 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SGSM1Q2NKQ1 1148 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 FAM26FQ5R3K3 315 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 C6orf118Q5T5N4 469 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PHF19Q5T6S3 580 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SFMBT2Q5VUG0 894 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ARHGEF18Q6ZSZ5 1173 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CROCCP2Q86T23 111 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ERICH1Q86X53 443 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 MFN1Q8IWA4 741 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 FAM126BQ8IXS8 530 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 UBA3Q8TBC4 463 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ARL8AQ96BM9 186 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 RMDN1Q96DB5 314 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ZBED3Q96IU2 234 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 KLHL5Q96PQ7 755 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TRIM31Q9BZY9 425 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ECT2Q9H8V3 914 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ZWILCHQ9H900 591 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 FAM49BQ9NUQ9 324 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 GCNT4Q9P109 453 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 GULP1Q9UBP9 304 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 XPO7Q9UIA9 1087 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 NFU1Q9UMS0 254 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CYP8B1Q9UNU6 501 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PATJQ8NI35 1801 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ESPNB1AK53 854 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ENC1O14682 589 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SNX2O60749 519 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 DTNBO60941 627 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 RPP40O75818 363 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ERVK-10P10266 1014 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 RBMS1P29558 406 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 GNA15P30679 374 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 AKT2P31751 481 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CLCNKBP51801 687 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TUBB4BP68371 445 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 FOXD4Q12950 439 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TRIM14Q14142 442 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SLC44A4Q53GD3 710 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 C10orf76Q5T2E6 689 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ASTLQ6HA08 431 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 KIAA1211LQ6NV74 962 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 C11orf88Q6PI97 169 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SLC36A4Q6YBV0 504 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ANKRD33Q7Z3H0 272 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TMEM86AQ8N2M4 240 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PPP1R14BQ96C90 147 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PRIMPOLQ96LW4 560 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 NECAB3Q96P71 396 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CGRRF1Q99675 332 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 REPIN1Q9BWE0 567 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 NT5C1AQ9BXI3 368 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 RIOX1Q9H6W3 641 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SYTL2Q9HCH5 934 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 IGSF9Q9P2J2 1179 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PRKAG3Q9UGI9 489 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 AMFRQ9UKV5 643 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ROBO3Q96MS0 1386 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 COL4A5P29400 1685 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ZNF646O15015 1829 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TMEM150BA6NC51 233 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ENO4A6NNW6 628 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ALG1L2C9J202 215 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CFAP99D6REC4 459 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 M0QYT0 321 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 GNGT2O14610 69 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ARHGAP6O43182 974 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CEP104O60308 925 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 EPB42P16452 691 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ICAM3P32942 547 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ETFBP38117 255 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 MAGEA1P43355 309 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ACADSBP45954 432 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 VPS41P49754 854 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 RGS7P49802 495 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 BLVRAP53004 296 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 GYS2P54840 703 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 GAD2Q05329 585 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms