RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 SLC10A2Q12908 348 aaPredicted RBP11.36□□□□□ -0.59
LIN54-207ENST00000508171 PDK2Q15119 407 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 CDHR3Q6ZTQ4 885 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 PPM1NQ8N819 430 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 C7orf31Q8N865 590 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 TTC17Q96AE7 1141 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 C18orf25Q96B23 403 aaPredicted RBP11.36□□□□□ -0.59
LIN54-207ENST00000508171 LRMDAQ9H2I8 198 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 DPEP3Q9H4B8 488 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 UGT1A7Q9HAW7 530 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 UGT1A10Q9HAW8 530 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 UGT1A8Q9HAW9 530 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 PAK5Q9P286 719 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 ZNF638Q14966 1978 aaKnown RBP11.36□□□□□ -0.59
LIN54-207ENST00000508171 A0A0G2JND7 137 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 C2CD2LO14523 706 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 NPTXRO95502 500 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 ZBED1O96006 694 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 ADORA2AP29274 412 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 SMYD5Q6GMV2 418 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 TMEM110Q86TL2 294 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 PPTC7Q8NI37 304 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 NSMCE1Q8WV22 266 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 ALKBH8Q96BT7 664 aaKnown RBP11.35□□□□□ -0.59
LIN54-207ENST00000508171 TBC1D10AQ9BXI6 508 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 SLC4A5Q9BY07 1137 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 CDHR5Q9HBB8 845 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 TUBGCP4Q9UGJ1 667 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 ZFP69BQ9UJL9 534 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 C2orf71A6NGG8 1288 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 METTL18O95568 372 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 DHRS4L1P0CG22 281 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 TSHRP16473 764 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 BGNP21810 368 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 CCND1P24385 295 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 HOXA11P31270 313 aaPredicted RBP11.35□□□□□ -0.59
LIN54-207ENST00000508171 NEK3P51956 506 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 GBE1Q04446 702 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 SLC18A2Q05940 514 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 CTC1Q2NKJ3 1217 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 FYB2Q5VWT5 728 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 SLC9A4Q6AI14 798 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 FASTKD5Q7L8L6 764 aaKnown RBP11.35□□□□□ -0.59
LIN54-207ENST00000508171 GIMAP7Q8NHV1 300 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 TSSK1BQ9BXA7 367 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 EIF2AQ9BY44 585 aaKnown RBP11.35□□□□□ -0.59
LIN54-207ENST00000508171 YY1AP1Q9H869 796 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 SMYD2Q9NRG4 433 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 ETNK2Q9NVF9 386 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 ZC3H7BQ9UGR2 993 aaKnown RBP11.35□□□□□ -0.59
LIN54-207ENST00000508171 GJD2Q9UKL4 321 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 TTLL3Q9Y4R7 772 aa11.35□□□□□ -0.59
LIN54-207ENST00000508171 TRIM49D1C9J1S8 452 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 ATP5HO75947 161 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 PDGFRBP09619 1106 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 EPHB2P29323 1055 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 GRIA1P42261 906 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 ZNF792Q3KQV3 632 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 SLC45A4Q5BKX6 768 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 TLDC1Q6P9B6 456 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 CLNKQ7Z7G1 428 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 MPP5Q8N3R9 675 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 OR6B3Q8NGW1 331 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 N4BP2L2Q92802 583 aaPredicted RBP11.34□□□□□ -0.59
LIN54-207ENST00000508171 RTP4Q96DX8 246 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 APOPT1Q96IL0 206 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 NRDE2Q9H7Z3 1164 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 KCNK13Q9HB14 408 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 POPDC2Q9HBU9 364 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 SETD4Q9NVD3 440 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 NKX1-2Q9UD57 310 aaPredicted RBP11.34□□□□□ -0.59
LIN54-207ENST00000508171 BCLAF3A2AJT9 711 aaKnown RBP11.34□□□□□ -0.59
LIN54-207ENST00000508171 DIAPH2O60879 1101 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 STAU1O95793 577 aaKnown RBP11.34□□□□□ -0.59
LIN54-207ENST00000508171 TROVE2P10155 538 aaKnown RBP eCLIP11.34□□□□□ -0.59
LIN54-207ENST00000508171 NEFHP12036 1026 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 GM2AP17900 193 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 TGM2P21980 687 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 CYP2F1P24903 491 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 L1CAMP32004 1257 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 GRM5P41594 1212 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 GRIK4Q16099 956 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 SOWAHAQ2M3V2 549 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 LONP2Q86WA8 852 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 SLC26A11Q86WA9 606 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 NETO2Q8NC67 525 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 PRR11Q96HE9 360 aaPredicted RBP11.34□□□□□ -0.59
LIN54-207ENST00000508171 RAB3IPQ96QF0 476 aaPredicted RBP11.34□□□□□ -0.59
LIN54-207ENST00000508171 TACO1Q9BSH4 297 aaKnown RBP11.34□□□□□ -0.59
LIN54-207ENST00000508171 MECRQ9BV79 373 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 FAM49AQ9H0Q0 323 aaPredicted RBP11.34□□□□□ -0.59
LIN54-207ENST00000508171 DHX35Q9H5Z1 703 aaKnown RBP11.34□□□□□ -0.59
LIN54-207ENST00000508171 HEY2Q9UBP5 337 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 MFHAS1Q9Y4C4 1052 aa11.34□□□□□ -0.59
LIN54-207ENST00000508171 SLC15A5A6NIM6 579 aa11.33□□□□□ -0.59
LIN54-207ENST00000508171 F5H423 210 aaPredicted RBP11.33□□□□□ -0.59
LIN54-207ENST00000508171 DPYSL4O14531 572 aa11.33□□□□□ -0.59
LIN54-207ENST00000508171 SNAI1O95863 264 aaPredicted RBP11.33□□□□□ -0.59
LIN54-207ENST00000508171 CCDC130P13994 396 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms