RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 IGFBP6P24592 240 aaPredicted RBP18.38■□□□□ 0.53
SFXN1-208ENST00000507823 XRCC4Q13426 336 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 DARS2Q6PI48 645 aaKnown RBP18.38■□□□□ 0.53
SFXN1-208ENST00000507823 CLEC20AQ6ZU45 233 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 SLC2A13Q96QE2 648 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 SELENOSQ9BQE4 189 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 RABEP2Q9H5N1 569 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 NRDE2Q9H7Z3 1164 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 UBN1Q9NPG3 1134 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 CRTAC1Q9NQ79 661 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 CTNNAL1Q9UBT7 734 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 USP3Q9Y6I4 520 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 THSD7BQ9C0I4 1608 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 TMEM63AO94886 807 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 ZFXP17010 805 aaPredicted RBP18.38■□□□□ 0.53
SFXN1-208ENST00000507823 BCAR1P56945 870 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 SLC8A3P57103 927 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 MRPS5P82675 430 aaKnown RBP18.38■□□□□ 0.53
SFXN1-208ENST00000507823 KCNJ11Q14654 390 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 OTUD1Q5VV17 481 aaPredicted RBP18.38■□□□□ 0.53
SFXN1-208ENST00000507823 CYP4F22Q6NT55 531 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 CYP4X1Q8N118 509 aa18.38■□□□□ 0.53
SFXN1-208ENST00000507823 RRP15Q9Y3B9 282 aaKnown RBP18.38■□□□□ 0.53
SFXN1-208ENST00000507823 CTSHP09668 335 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 DRD4P21917 467 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 PAX3P23760 479 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 AFF1P51825 1210 aaKnown RBP18.37■□□□□ 0.53
SFXN1-208ENST00000507823 PDIA2Q13087 525 aaKnown RBP18.37■□□□□ 0.53
SFXN1-208ENST00000507823 NR1H3Q13133 447 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 TRIM71Q2Q1W2 868 aaKnown RBP18.37■□□□□ 0.53
SFXN1-208ENST00000507823 TADA2BQ86TJ2 420 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 WDR83Q9BRX9 315 aaKnown RBP18.37■□□□□ 0.53
SFXN1-208ENST00000507823 INTS9Q9NV88 658 aaKnown RBP18.37■□□□□ 0.53
SFXN1-208ENST00000507823 PAK5Q9P286 719 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 CLUHO75153 1309 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 CHADO15335 359 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 CYP2F1P24903 491 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 NR2C2P49116 596 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 GPX6P59796 221 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 CAP1Q01518 475 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 KCNA10Q16322 511 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 FNBP1LQ5T0N5 605 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 C4orf22Q6V702 233 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 ZBED8Q8IZ13 594 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 CHMP6Q96FZ7 201 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 NPY6RQ99463 290 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 FAM107BQ9H098 131 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 DDX43Q9NXZ2 648 aaKnown RBP18.37■□□□□ 0.53
SFXN1-208ENST00000507823 SLC24A2Q9UI40 661 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 AP4E1Q9UPM8 1137 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 SQORQ9Y6N5 450 aa18.37■□□□□ 0.53
SFXN1-208ENST00000507823 TCRBV7S3A2A0A539 114 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 BEST1O76090 585 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 NOS2P35228 1153 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 CLCNKBP51801 687 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 ADIGQ0VDE8 80 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 UPP1Q16831 310 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 MSS51Q4VC12 460 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 EFHC2Q5JST6 749 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 C3orf58Q8NDZ4 430 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 KCTD15Q96SI1 283 aaPredicted RBP18.36■□□□□ 0.53
SFXN1-208ENST00000507823 FRMD8Q9BZ67 464 aaPredicted RBP18.36■□□□□ 0.53
SFXN1-208ENST00000507823 CDH9Q9ULB4 789 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 PADI3Q9ULW8 664 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 PTCH2Q9Y6C5 1203 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 TMEM88BA6NKF7 163 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 CLDN5O00501 218 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 INPPL1O15357 1258 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 FBXO21O94952 628 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 ACAT1P24752 427 aaKnown RBP18.36■□□□□ 0.53
SFXN1-208ENST00000507823 GAD2Q05329 585 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 PTK7Q13308 1070 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 CCDC38Q502W7 563 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 RAB41Q5JT25 222 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 C1orf228Q6PIY5 440 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 C6orf89Q6UWU4 347 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 DEFB106AQ8N104 65 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 LPPQ93052 612 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 SYT15Q9BQS2 421 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 OSBPL7Q9BZF2 842 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 FZD10Q9ULW2 581 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.36■□□□□ 0.53
SFXN1-208ENST00000507823 A0A0U1RQF3 1178 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 H7C0C1 242 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 MGEA5O60502 916 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 CCND3P30281 292 aaPredicted RBP18.36■□□□□ 0.53
SFXN1-208ENST00000507823 ATP5OP48047 213 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 ATXN1P54253 815 aaKnown RBP18.36■□□□□ 0.53
SFXN1-208ENST00000507823 YWHAZP63104 245 aaKnown RBP18.36■□□□□ 0.53
SFXN1-208ENST00000507823 RNASELQ05823 741 aaKnown RBP18.36■□□□□ 0.53
SFXN1-208ENST00000507823 MDH1BQ5I0G3 518 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 YTHDF3Q7Z739 585 aaKnown RBP18.36■□□□□ 0.53
SFXN1-208ENST00000507823 ZC3H18Q86VM9 953 aaKnown RBP18.36■□□□□ 0.53
SFXN1-208ENST00000507823 CCDC13Q8IYE1 715 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 CCDC185Q8N715 623 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 CSPG4P5Q96PW8 444 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 DHRS4Q9BTZ2 278 aa18.36■□□□□ 0.53
SFXN1-208ENST00000507823 ABT1Q9ULW3 272 aaKnown RBP18.36■□□□□ 0.53
SFXN1-208ENST00000507823 EXOC1LA0A1B0GW35 172 aa18.35■□□□□ 0.53
SFXN1-208ENST00000507823 C9IYK1 514 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms