RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 PDGFRBP09619 1106 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 NCAM1P13591 858 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 NTSR1P30989 418 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 RDXP35241 583 aaKnown RBP9.49□□□□□ -0.89
COPS4-205ENST00000507376 CASP5P51878 434 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 ZNF131P52739 623 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 SMARCB1Q12824 385 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 ANO4Q32M45 955 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 DCAF12L1Q5VU92 463 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 FAM171BQ6P995 826 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 SLC36A4Q6YBV0 504 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 DENND5BQ6ZUT9 1274 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 SFR1Q86XK3 245 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 SCUBE3Q8IX30 993 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 CHPFQ8IZ52 775 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 OR5B17Q8NGF7 314 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 NOC3LQ8WTT2 800 aaKnown RBP9.49□□□□□ -0.89
COPS4-205ENST00000507376 TOE1Q96GM8 510 aaKnown RBP9.49□□□□□ -0.89
COPS4-205ENST00000507376 PCED1BQ96HM7 432 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 MRPL45Q9BRJ2 306 aaKnown RBP9.49□□□□□ -0.89
COPS4-205ENST00000507376 FAM213AQ9BRX8 229 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 TTLL2Q9BWV7 592 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 FOXP1Q9H334 677 aaPredicted RBP9.49□□□□□ -0.89
COPS4-205ENST00000507376 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.49□□□□□ -0.89
COPS4-205ENST00000507376 DNAJC17Q9NVM6 304 aaKnown RBP9.49□□□□□ -0.89
COPS4-205ENST00000507376 PLK2Q9NYY3 685 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 TRPM5Q9NZQ8 1165 aa9.49□□□□□ -0.89
COPS4-205ENST00000507376 EIF2B4Q9UI10 523 aaKnown RBP9.49□□□□□ -0.89
COPS4-205ENST00000507376 KNTC1P50748 2209 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 NEDD8-MDP1E9PL57 170 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 MDM4O15151 490 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 HOXC11O43248 304 aaPredicted RBP9.48□□□□□ -0.89
COPS4-205ENST00000507376 GREM1O60565 184 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 FAM13AO94988 1023 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 EIF2DP41214 584 aaKnown RBP9.48□□□□□ -0.89
COPS4-205ENST00000507376 MAGEA11P43364 429 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 TNFRSF4P43489 277 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 CSNK1EP49674 416 aaKnown RBP9.48□□□□□ -0.89
COPS4-205ENST00000507376 MYL7Q01449 175 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 SEMG2Q02383 582 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 DNAJC3Q13217 504 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 SLC14A1Q13336 389 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 ORC2Q13416 577 aaPredicted RBP9.48□□□□□ -0.89
COPS4-205ENST00000507376 PTPRNQ16849 979 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 KIF19Q2TAC6 998 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 FUT11Q495W5 492 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 PRAMEF14Q5SWL7 426 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 TPGS1Q6ZTW0 290 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 FAM124AQ86V42 546 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 BRSK2Q8IWQ3 736 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 CD302Q8IX05 232 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 FBXO18Q8NFZ0 1043 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 C1orf216Q8TAB5 229 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 SCAMP5Q8TAC9 235 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 RHBDD1Q8TEB9 315 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 SNX19Q92543 992 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 GABRG3Q99928 467 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 TIPINQ9BVW5 301 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 ASB7Q9H672 318 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 CAAP1Q9H8G2 361 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 PDE11AQ9HCR9 933 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 TBC1D7Q9P0N9 293 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 LARSQ9P2J5 1176 aaKnown RBP9.48□□□□□ -0.89
COPS4-205ENST00000507376 SNX11Q9Y5W9 270 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 STYXL1Q9Y6J8 313 aa9.48□□□□□ -0.89
COPS4-205ENST00000507376 A0A1B0GTW7 788 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 HUS1O60921 280 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 NDUFS2O75306 463 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 CD6P30203 668 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 DPP6P42658 865 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 MATKP42679 507 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 GTF2BQ00403 316 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 HNRNPDQ14103 355 aaKnown RBP9.47□□□□□ -0.89
COPS4-205ENST00000507376 SMAD1Q15797 465 aaKnown RBP9.47□□□□□ -0.89
COPS4-205ENST00000507376 HSF5Q4G112 596 aaPredicted RBP9.47□□□□□ -0.89
COPS4-205ENST00000507376 GRAMD4Q6IC98 578 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 ZNF605Q86T29 641 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 GATAD2AQ86YP4 633 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 LURAP1LQ8IV03 231 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 CSGALNACT2Q8N6G5 542 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 FSIP1Q8NA03 581 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 CCDC26Q8TAB7 109 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 SORCS1Q8WY21 1168 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 POMGNT1Q8WZA1 660 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 KCNN1Q92952 543 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 FUBP3Q96I24 572 aaKnown RBP eCLIP9.47□□□□□ -0.89
COPS4-205ENST00000507376 CBWD1Q9BRT8 395 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.47□□□□□ -0.89
COPS4-205ENST00000507376 C6orf106Q9H6K1 298 aaPredicted RBP9.47□□□□□ -0.89
COPS4-205ENST00000507376 PARVGQ9HBI0 331 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 SPHK2Q9NRA0 654 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 WSB2Q9NYS7 404 aaPredicted RBP9.47□□□□□ -0.89
COPS4-205ENST00000507376 USP36Q9P275 1121 aaKnown RBP9.47□□□□□ -0.89
COPS4-205ENST00000507376 DEC1Q9P2X7 70 aa9.47□□□□□ -0.89
COPS4-205ENST00000507376 H0Y8X5 98 aa9.46□□□□□ -0.9
COPS4-205ENST00000507376 J3QKU1 62 aa9.46□□□□□ -0.9
COPS4-205ENST00000507376 BCAT2O15382 392 aaPredicted RBP9.46□□□□□ -0.9
COPS4-205ENST00000507376 TBX18O95935 607 aa9.46□□□□□ -0.9
COPS4-205ENST00000507376 PRKCHP24723 683 aa9.46□□□□□ -0.9
COPS4-205ENST00000507376 IL12RB1P42701 662 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms