RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, human

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42SE2-210	ENST00000506929	HOXA4	Q00056	320 aa	Predicted RBP	4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	HLTF	Q14527	1009 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SEC23B	Q15437	767 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CEP78	Q5JTW2	689 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CCDC181	Q5TID7	509 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PTCHD4	Q6ZW05	846 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	NOL8	Q76FK4	1167 aa	Known RBP	4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	FSTL5	Q8N475	847 aa	Predicted RBP	4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PNLDC1	Q8NA58	520 aa	Known RBP	4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SVIP	Q8NHG7	77 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SUN3	Q8TAQ9	357 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	IPO4	Q8TEX9	1081 aa	Known RBP	4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	RSPRY1	Q96DX4	576 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	KAZALD1	Q96I82	304 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	MYD88	Q99836	296 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	QTRT1	Q9BXR0	403 aa	Known RBP	4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	MAGEB5	Q9BZ81	275 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	FAM83D	Q9H4H8	585 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	CERS4	Q9HA82	394 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	RGL1	Q9NZL6	768 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	IGSF9	Q9P2J2	1179 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PCDHB2	Q9Y5E7	798 aa		4.1	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PRRT4	C9JH25	899 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929		M0QZQ0	153 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	INMT	O95050	263 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	MBP	P02686	304 aa	Predicted RBP	4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	DLD	P09622	509 aa	Known RBP	4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PEPD	P12955	493 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	EEF1G	P26641	437 aa	Known RBP	4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	RBL1	P28749	1068 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	IL6ST	P40189	918 aa	Predicted RBP	4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	EIF4A1	P60842	406 aa	Known RBP	4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	TBC1D25	Q3MII6	688 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	IZUMO3	Q5VZ72	239 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	GGT6	Q6P531	493 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	DPP9	Q86TI2	863 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	MAFA	Q8NHW3	353 aa	Predicted RBP	4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	ZNF566	Q969W8	418 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	DAZAP1	Q96EP5	407 aa	Known RBP	4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	EDC3	Q96F86	508 aa	Known RBP	4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	SNX18	Q96RF0	628 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	COLEC11	Q9BWP8	271 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	EPS8L2	Q9H6S3	715 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	TMEM8A	Q9HCN3	771 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	FSCN3	Q9NQT6	498 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	PDGFC	Q9NRA1	345 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	VPS45	Q9NRW7	570 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	VPS4A	Q9UN37	437 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	COL15A1	P39059	1388 aa		4.09	□□□□□ -1.75
CDC42SE2-210	ENST00000506929	LINC01548	A6NM66	108 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	SNX2	O60749	519 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	WDR47	O94967	919 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	LATS1	O95835	1130 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	SUMO2	P61956	95 aa	Known RBP	4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	GPC5	P78333	572 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	SRSF4	Q08170	494 aa	Known RBP	4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	FOXF2	Q12947	444 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	GPS1	Q13098	491 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	ACOX1	Q15067	660 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	AASDH	Q4L235	1098 aa	Predicted RBP	4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	FAXC	Q5TGI0	409 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	BEND5	Q7L4P6	421 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	HASPIN	Q8TF76	798 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	MCRS1	Q96EZ8	462 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	ZDHHC12	Q96GR4	267 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	C5orf34	Q96MH7	638 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	ELAC2	Q9BQ52	826 aa	Known RBP	4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	USP29	Q9HBJ7	922 aa		4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.08	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	CCDC194	A0A1B0GVG4	234 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	AQP12B	A6NM10	295 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	C16orf96	A6NNT2	1141 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	PODXL	O00592	558 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	FYB1	O15117	783 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	COQ9	O75208	318 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	PRKCG	P05129	697 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	TMEM225B	P0DP42	221 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	CYP2A6	P11509	494 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	MYCL	P12524	364 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	ALAD	P13716	330 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	DRD1	P21728	446 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	SFPQ	P23246	707 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	SLC14A1	Q13336	389 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	SUPT20HL1	Q3ZLR7	823 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	TMEM196	Q5HYL7	178 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	SUMO4	Q6EEV6	95 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	SERPINA13P	Q6UXR4	307 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	ZNF804A	Q7Z570	1209 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	MORC1	Q86VD1	984 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	SFTPA1	Q8IWL2	248 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	FAM186B	Q8IYM0	893 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	LINC01465	Q8N7H1	131 aa		4.07	□□□□□ -1.76
CDC42SE2-210	ENST00000506929	CCDC150	Q8NCX0	1101 aa		4.07	□□□□□ -1.76

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