RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 C3orf20Q8ND61 904 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 CCDC112Q8NEF3 446 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 GIPC2Q8TF65 315 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 RNF139Q8WU17 664 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 SHDQ96IW2 340 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 ZSWIM1Q9BR11 485 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 ISCUQ9H1K1 167 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 SLITRK6Q9H5Y7 841 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 SYNCQ9H7C4 482 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.87□□□□□ -0.99
PDGFC-205ENST00000506880 TMEM30AQ9NV96 361 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 DONSONQ9NYP3 566 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 LSM7Q9UK45 103 aaKnown RBP8.87□□□□□ -0.99
PDGFC-205ENST00000506880 STAP1Q9ULZ2 295 aa8.87□□□□□ -0.99
PDGFC-205ENST00000506880 FARP1Q9Y4F1 1045 aaPredicted RBP8.87□□□□□ -0.99
PDGFC-205ENST00000506880 A0A0C4DFX4 3053 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 GOLGA6L3A6NEY3 463 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 IRAK2O43187 625 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 TADA3O75528 432 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 BEST1O76090 585 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 CSPG5O95196 566 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 IPO7O95373 1038 aaKnown RBP8.86□□□□□ -0.99
PDGFC-205ENST00000506880 CKMP06732 381 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 SRFP11831 508 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 CASP14P31944 242 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 HTR7P34969 479 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 NOS2P35228 1153 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 CHKAP35790 457 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 EIF2DP41214 584 aaKnown RBP8.86□□□□□ -0.99
PDGFC-205ENST00000506880 MATKP42679 507 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 NUBP1P53384 320 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 CACNA2D1P54289 1103 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 RBM10P98175 930 aaKnown RBP8.86□□□□□ -0.99
PDGFC-205ENST00000506880 SLC6A3Q01959 620 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 PRKCQQ04759 706 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 TCEAL1Q15170 157 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 SLC18A3Q16572 532 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 SLC5A9Q2M3M2 681 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 MPP7Q5T2T1 576 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 BSPRYQ5W0U4 402 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 ACAD10Q6JQN1 1059 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 CC2D1AQ6P1N0 951 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-205ENST00000506880 HTR3DQ70Z44 454 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 GET4Q7L5D6 327 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-205ENST00000506880 GAS2L3Q86XJ1 694 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 TMTC1Q8IUR5 882 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 ARID3BQ8IVW6 561 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-205ENST00000506880 SCAMP5Q8TAC9 235 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 SLC30A5Q8TAD4 765 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 ITFG1Q8TB96 612 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 ZSCAN18Q8TBC5 510 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-205ENST00000506880 BPIFB1Q8TDL5 484 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 ATP2A3Q93084 1043 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 NT5C3BQ969T7 300 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 MCRS1Q96EZ8 462 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 SLC2A13Q96QE2 648 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 MYADMQ96S97 322 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 NELL2Q99435 816 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 OSBPL6Q9BZF3 934 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 ULBP1Q9BZM6 244 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 SMOC2Q9H3U7 446 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 C8orf33Q9H7E9 229 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-205ENST00000506880 ZNF334Q9HCZ1 680 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-205ENST00000506880 ABHD10Q9NUJ1 306 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 PARVAQ9NVD7 372 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 HCFC1R1Q9NWW0 138 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 WNT16Q9UBV4 365 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 SLC12A6Q9UHW9 1150 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 STOML2Q9UJZ1 356 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 MAGED2Q9UNF1 606 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-205ENST00000506880 DUSP12Q9UNI6 340 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 TLR6Q9Y2C9 796 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 C5orf42Q9H799 3197 aa8.86□□□□□ -0.99
PDGFC-205ENST00000506880 CXorf51AA0A1B0GTR3 108 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 SIGLEC16A6NMB1 481 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 C2CD4DB7Z1M9 353 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 E5RJQ4 531 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 RBAK-RBAKDNI3L0D1 243 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 MAN2B1O00754 1011 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 DAB1O75553 588 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 LCA5LO95447 670 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 MMEP08473 750 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 RARGP13631 454 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 IL9P15248 144 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 CEBPBP17676 345 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 CYLC1P35663 651 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-205ENST00000506880 CCR2P41597 374 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 PTPN9P43378 593 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 HARS2P49590 506 aaKnown RBP8.85□□□□□ -0.99
PDGFC-205ENST00000506880 KLK7P49862 253 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 USP46P62068 366 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 TFF2Q03403 129 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 PPP2R5DQ14738 602 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 TEAD2Q15562 447 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 TRIP4Q15650 581 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-205ENST00000506880 ZNF77Q15935 545 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 PTPN21Q16825 1174 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 PTPN20Q4JDL3 420 aa8.85□□□□□ -0.99
PDGFC-205ENST00000506880 TDRD12Q587J7 1177 aaKnown RBP8.85□□□□□ -0.99
PDGFC-205ENST00000506880 BRMS1LQ5PSV4 323 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 190.1 ms