RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 VIPR2P41587 438 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 NSFP46459 744 aaKnown RBP9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 EPHA5P54756 1037 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 YWHAGP61981 247 aaKnown RBP eCLIP9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 MRPS5P82675 430 aaKnown RBP9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 CENPCQ03188 943 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 ITIH3Q06033 890 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 SMAD4Q13485 552 aaKnown RBP9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 LEXMQ3ZCV2 418 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 RAB6CQ53S08 254 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 SYPL2Q5VXT5 272 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 BSPRYQ5W0U4 402 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 PM20D1Q6GTS8 502 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 TRNP1Q6NT89 227 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 ALKBH5Q6P6C2 394 aaKnown RBP9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 TRIM72Q6ZMU5 477 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 MON1BQ7L1V2 547 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 NPAS3Q8IXF0 933 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 MCOLN2Q8IZK6 566 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 EMC1Q8N766 993 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 ACRBPQ8NEB7 543 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 JOSD2Q8TAC2 188 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 STK32AQ8WU08 396 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 FGF13Q92913 245 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 FAM149B1Q96BN6 582 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 ARHGEF26Q96DR7 871 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 CCDC42Q96M95 316 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 SLITRK1Q96PX8 696 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 BAG1Q99933 345 aaPredicted RBP9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 DESI2Q9BSY9 194 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 RPP25Q9BUL9 199 aaKnown RBP9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 TRIM7Q9C029 511 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 RAB6CQ9H0N0 254 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 GKN1Q9NS71 199 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 SMPD4Q9NXE4 827 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 TRPM5Q9NZQ8 1165 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 SFMBT1Q9UHJ3 866 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 CCL26Q9Y258 94 aa9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 BZW2Q9Y6E2 419 aaKnown RBP9.27□□□□□ -0.93
SCAMP1-202ENST00000506858 TCF20Q9UGU0 1960 aaKnown RBP9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 SYNJ2BP-COX16A0A087WUM0 186 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 FAM92AA1XBS5 289 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 PAPLNO95428 1278 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 HMBSP08397 361 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 ZDHHC11BP0C7U3 371 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 RARGP13631 454 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 MTHFRP42898 656 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 GALCP54803 685 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 ZXDBP98169 803 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 FAM102AQ5T9C2 384 aaPredicted RBP9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 OLFML1Q6UWY5 402 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 RTL10Q7L3V2 364 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 PHF13Q86YI8 300 aaPredicted RBP9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 DEFB106AQ8N104 65 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 RIN3Q8TB24 985 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 RSAD2Q8WXG1 361 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 MRPS31Q92665 395 aaKnown RBP9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 RSPRY1Q96DX4 576 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 TRMT2BQ96GJ1 504 aaKnown RBP9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 RIPOR3Q96MK2 946 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 NECAB3Q96P71 396 aaPredicted RBP9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 LRRC3BQ96PB8 259 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 NOX5Q96PH1 765 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 EPAS1Q99814 870 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 ADAM33Q9BZ11 813 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 THAP2Q9H0W7 228 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 FBXO44Q9H4M3 255 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 PNPLA8Q9NP80 782 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 CNGB3Q9NQW8 809 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 METTL5Q9NRN9 209 aaKnown RBP9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 COX16Q9P0S2 106 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 NENFQ9UMX5 172 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 COG5Q9UP83 839 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 REXO2Q9Y3B8 237 aaKnown RBP9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 NCANO14594 1321 aa9.26□□□□□ -0.93
SCAMP1-202ENST00000506858 DOCK8Q8NF50 2099 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 RCCD1A6NED2 376 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 C2CD4DB7Z1M9 353 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 MSI1O43347 362 aaKnown RBP9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 COCHO43405 550 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 TLR5O60602 858 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 RTN2O75298 545 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 PRAMEF12O95522 483 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 PTMAP06454 111 aaKnown RBP9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 IRF1P10914 325 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 HDCP19113 662 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 FECHP22830 423 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 FLT3P36888 993 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 ACADSBP45954 432 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 GABRB2P47870 512 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 ATXN1P54253 815 aaKnown RBP9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 RPL7AP62424 266 aaKnown RBP9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 CDK17Q00537 523 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 SLC6A3Q01959 620 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 EFEMP1Q12805 493 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 SLC18A3Q16572 532 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 FAM78AQ5JUQ0 283 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 C10orf120Q5SQS8 335 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 SH3PXD2AQ5TCZ1 1133 aa9.25□□□□□ -0.93
SCAMP1-202ENST00000506858 BTBD8Q5XKL5 378 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms