RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ADAMTS3O15072 1205 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 TMPRSS11DO60235 418 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 COQ9O75208 318 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 JTBO76095 146 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 WDR47O94967 919 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 SETSIPP0DME0 302 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 IDEP14735 1019 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 CD19P15391 556 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 PECAM1P16284 738 aaPredicted RBP3.43□□□□□ -1.86
GYPB-207ENST00000506679 FPR3P25089 353 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 DIO1P49895 249 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 TFF2Q03403 129 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 GPS1Q13098 491 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 RAB30Q15771 203 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 PCID2Q5JVF3 399 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 TMTC4Q5T4D3 741 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 RD3Q7Z3Z2 195 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 AMIGO2Q86SJ2 522 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 SIRT6Q8N6T7 355 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.43□□□□□ -1.86
GYPB-207ENST00000506679 CCDC150Q8NCX0 1101 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 ZNF566Q969W8 418 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 ZG16BQ96DA0 208 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 KAZALD1Q96I82 304 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 SNX18Q96RF0 628 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 MACROD1Q9BQ69 325 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 RXFP3Q9NSD7 469 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 GAR1Q9NY12 217 aaKnown RBP3.43□□□□□ -1.86
GYPB-207ENST00000506679 NKX1-2Q9UD57 310 aaPredicted RBP3.43□□□□□ -1.86
GYPB-207ENST00000506679 TAGLN3Q9UI15 199 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 CA14Q9ULX7 337 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 DTNAQ9Y4J8 743 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 WNT6Q9Y6F9 365 aa3.43□□□□□ -1.86
GYPB-207ENST00000506679 TCRBV5S1A1TA0A578 114 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 PODXLO00592 558 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 PCDH17O14917 1159 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 CCNT2O60583 730 aaKnown RBP3.42□□□□□ -1.86
GYPB-207ENST00000506679 SNX2O60749 519 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 PDE8BO95263 885 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 GLP2RO95838 553 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 CREB1P16220 341 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 FBLP22087 321 aaKnown RBP3.42□□□□□ -1.86
GYPB-207ENST00000506679 NANOS3P60323 173 aaKnown RBP3.42□□□□□ -1.86
GYPB-207ENST00000506679 EIF4A1P60842 406 aaKnown RBP3.42□□□□□ -1.86
GYPB-207ENST00000506679 HOXA4Q00056 320 aaPredicted RBP3.42□□□□□ -1.86
GYPB-207ENST00000506679 DEUP1Q05D60 604 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 NSUN2Q08J23 767 aaKnown RBP eCLIP3.42□□□□□ -1.86
GYPB-207ENST00000506679 LMAN2Q12907 356 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 KRT72Q14CN4 511 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 BRD3Q15059 726 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 PROSER3Q2NL68 480 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 AASDHQ4L235 1098 aaPredicted RBP3.42□□□□□ -1.86
GYPB-207ENST00000506679 AKNAD1Q5T1N1 836 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 L1TD1Q5T7N2 865 aaKnown RBP3.42□□□□□ -1.86
GYPB-207ENST00000506679 FAM90A2PQ658T7 463 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 ARL6IP4Q66PJ3 421 aaKnown RBP3.42□□□□□ -1.86
GYPB-207ENST00000506679 FCRLBQ6BAA4 426 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 GRHL2Q6ISB3 625 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 TLDC1Q6P9B6 456 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 CLEC9AQ6UXN8 241 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 NAPRTQ6XQN6 538 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 BCDIN3DQ7Z5W3 292 aaKnown RBP3.42□□□□□ -1.86
GYPB-207ENST00000506679 ARHGEF25Q86VW2 580 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 C11orf44Q8N8P7 122 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 PNPLA1Q8N8W4 532 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 ACRBPQ8NEB7 543 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 ABHD5Q8WTS1 349 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 NELL1Q92832 810 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 MMS19Q96T76 1030 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 MPHOSPH6Q99547 160 aaKnown RBP3.42□□□□□ -1.86
GYPB-207ENST00000506679 NUDT22Q9BRQ3 303 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.42□□□□□ -1.86
GYPB-207ENST00000506679 ARFGAP3Q9NP61 516 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 PLCB1Q9NQ66 1216 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 ASIC5Q9NY37 505 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 TMOD4Q9NZQ9 345 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 IGSF9Q9P2J2 1179 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 CDC23Q9UJX2 597 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 SLC39A10Q9ULF5 831 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 ASAP1Q9ULH1 1129 aa3.42□□□□□ -1.86
GYPB-207ENST00000506679 A0A087WV62 115 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 GXYLT2A0PJZ3 443 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 GOLGA6L3A6NEY3 463 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 H3BNC9 293 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 CES2O00748 559 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 NTSR2O95665 410 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 LATS1O95835 1130 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 MBPP02686 304 aaPredicted RBP3.41□□□□□ -1.86
GYPB-207ENST00000506679 NHLRC4P0CG21 123 aaPredicted RBP3.41□□□□□ -1.86
GYPB-207ENST00000506679 TMEM225BP0DP42 221 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 APEHP13798 732 aaKnown RBP3.41□□□□□ -1.86
GYPB-207ENST00000506679 ATF7P17544 494 aaPredicted RBP3.41□□□□□ -1.86
GYPB-207ENST00000506679 ADRA1DP25100 572 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 RENBPP51606 427 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 TNFAIP2Q03169 654 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 KCNJ12Q14500 433 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 ARHGAP15Q53QZ3 475 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 FBXO38Q6PIJ6 1188 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 TRIM72Q6ZMU5 477 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 ZNF788Q6ZQV5 615 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms