RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 OR1N1Q8NGS0 311 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 SOCS4Q8WXH5 440 aa6.87□□□□□ -1.31
HERC4-213ENST00000506515 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.87□□□□□ -1.31
HERC4-213ENST00000506515 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.87□□□□□ -1.31
HERC4-213ENST00000506515 CCNL1Q9UK58 526 aaPredicted RBP6.87□□□□□ -1.31
HERC4-213ENST00000506515 PNMA6EA0A0J9YXQ4 647 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 NPIPB8E9PQR5 432 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 MPPED1O15442 326 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 NTSR2O95665 410 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 ANXA6P08133 673 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 ZFXP17010 805 aaPredicted RBP6.86□□□□□ -1.31
HERC4-213ENST00000506515 MAKP20794 623 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 KLRK1P26718 216 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 AKT1P31749 480 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 HTR7P34969 479 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 TAF5Q15542 800 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 TXNRD1Q16881 649 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 KAZNQ674X7 775 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 Q6ZNX1 250 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 CCDC117Q8IWD4 279 aaPredicted RBP6.86□□□□□ -1.31
HERC4-213ENST00000506515 SUN3Q8TAQ9 357 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 RUBCNQ92622 972 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 EID2BQ96D98 161 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 ISCA1Q9BUE6 129 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 CYP4F11Q9HBI6 524 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 NKX1-2Q9UD57 310 aaPredicted RBP6.86□□□□□ -1.31
HERC4-213ENST00000506515 STEAP1Q9UHE8 339 aa6.86□□□□□ -1.31
HERC4-213ENST00000506515 HERC5Q9UII4 1024 aaKnown RBP6.86□□□□□ -1.31
HERC4-213ENST00000506515 UHRF1BP1LA0JNW5 1464 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 UACAQ9BZF9 1416 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 WDR27A2RRH5 827 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 IPO5O00410 1097 aaKnown RBP6.85□□□□□ -1.31
HERC4-213ENST00000506515 NXPH3O95157 252 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 ADRB1P08588 477 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 DHRS4L1P0CG22 281 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 HKR1P10072 659 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 CD19P15391 556 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 BLOC1S1P78537 153 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 BMPR2Q13873 1038 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 GRM4Q14833 912 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 TRIM71Q2Q1W2 868 aaKnown RBP6.85□□□□□ -1.31
HERC4-213ENST00000506515 P3H1Q32P28 736 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 IGFL4Q6B9Z1 124 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 RINT1Q6NUQ1 792 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 TTC30AQ86WT1 665 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 VRK3Q8IV63 474 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 GALNT15Q8N3T1 639 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 LRRC71Q8N4P6 559 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 STT3BQ8TCJ2 826 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 CAVIN3Q969G5 261 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 RFKQ969G6 155 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 PBKQ96KB5 322 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 FAM167BQ9BTA0 163 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 MLXIPQ9HAP2 919 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 FSCN3Q9NQT6 498 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 ITM2CQ9NQX7 267 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 LPAR3Q9UBY5 353 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 GPR52Q9Y2T5 361 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 ADCY10Q96PN6 1610 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 HECW2Q9P2P5 1572 aa6.85□□□□□ -1.31
HERC4-213ENST00000506515 KIF27Q86VH2 1401 aa6.84□□□□□ -1.31
HERC4-213ENST00000506515 COL15A1P39059 1388 aa6.84□□□□□ -1.31
HERC4-213ENST00000506515 TTBK1Q5TCY1 1321 aaPredicted RBP6.84□□□□□ -1.31
HERC4-213ENST00000506515 ONECUT2O95948 504 aa6.84□□□□□ -1.31
HERC4-213ENST00000506515 RAB11FIP4Q86YS3 637 aa6.84□□□□□ -1.31
HERC4-213ENST00000506515 SUGP1Q8IWZ8 645 aaKnown RBP6.84□□□□□ -1.31
HERC4-213ENST00000506515 NRSN1Q8IZ57 195 aa6.84□□□□□ -1.31
HERC4-213ENST00000506515 WDR24Q96S15 920 aa6.84□□□□□ -1.31
HERC4-213ENST00000506515 ZNF747Q9BV97 191 aa6.84□□□□□ -1.31
HERC4-213ENST00000506515 TP63Q9H3D4 680 aaPredicted RBP6.84□□□□□ -1.31
HERC4-213ENST00000506515 LMTK3Q96Q04 1460 aa6.84□□□□□ -1.31
HERC4-213ENST00000506515 MAST3O60307 1309 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 HMX3A6NHT5 357 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 AP4M1O00189 453 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 NARSO43776 548 aaKnown RBP6.83□□□□□ -1.32
HERC4-213ENST00000506515 PMPCBO75439 489 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 TAF5LO75529 589 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 ACTL6BO94805 426 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 WDR47O94967 919 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 ZNF202O95125 648 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 TMEM225BP0DP42 221 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 PBX1P40424 430 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 CCT5P48643 541 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 TPTEP56180 551 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 POLE2P56282 527 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 EIF4A1P60842 406 aaKnown RBP6.83□□□□□ -1.32
HERC4-213ENST00000506515 CLCA4Q14CN2 919 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 BTBD16Q32M84 506 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 NBPF8Q3BBV2 869 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 TMEM196Q5HYL7 178 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 KIAA0895LQ68EN5 471 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 TANGO2Q6ICL3 276 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 OTUD7AQ8TE49 926 aaPredicted RBP6.83□□□□□ -1.32
HERC4-213ENST00000506515 RSPRY1Q96DX4 576 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 PRR25Q96S07 402 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 RTKNQ9BST9 563 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 ARHGEF3Q9NR81 526 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 LRIT1Q9P2V4 623 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 SH2B3Q9UQQ2 575 aa6.83□□□□□ -1.32
HERC4-213ENST00000506515 BIVM-ERCC5R4GMW8 1640 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms