RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 OTUB2Q96DC9 234 aa15.18■□□□□ 0.02
CDC42SE2-209ENST00000506419 P2RY11Q96G91 374 aa15.18■□□□□ 0.02
CDC42SE2-209ENST00000506419 CCDC34Q96HJ3 373 aa15.18■□□□□ 0.02
CDC42SE2-209ENST00000506419 LOXL4Q96JB6 756 aa15.18■□□□□ 0.02
CDC42SE2-209ENST00000506419 PNPLA8Q9NP80 782 aa15.18■□□□□ 0.02
CDC42SE2-209ENST00000506419 ARHGEF4Q9NR80 690 aa15.18■□□□□ 0.02
CDC42SE2-209ENST00000506419 SPHK2Q9NRA0 654 aa15.18■□□□□ 0.02
CDC42SE2-209ENST00000506419 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.18■□□□□ 0.02
CDC42SE2-209ENST00000506419 MMP17Q9ULZ9 603 aa15.18■□□□□ 0.02
CDC42SE2-209ENST00000506419 NCOR2Q9Y618 2525 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 SGK1O00141 431 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 SLC16A3O15427 465 aaKnown RBP15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 HOXC11O43248 304 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 STX10O60499 249 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 GADD45BO75293 160 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 TULP3O75386 442 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 APODP05090 189 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 BMP6P22004 513 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 TIE1P35590 1138 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 GRIA2P42262 883 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 TNFRSF4P43489 277 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 DGKEP52429 567 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 CRY1Q16526 586 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 RASSF3Q86WH2 238 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 ELOA2Q8IYF1 753 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 ALLCQ8N6M5 410 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 TXNDC5Q8NBS9 432 aaKnown RBP15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 CCDC26Q8TAB7 109 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 UBXN6Q9BZV1 441 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 NACA2Q9H009 215 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 RXFP3Q9NSD7 469 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 MAN1B1Q9UKM7 699 aa15.17■□□□□ 0.02
CDC42SE2-209ENST00000506419 SPTBN2O15020 2390 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 PPP1R3GB7ZBB8 358 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 TULP2O00295 520 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 ADAM23O75077 832 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 EPN2O95208 641 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 KLF8O95600 359 aaPredicted RBP15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 KDSRQ06136 332 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 SF3A2Q15428 464 aaKnown RBP15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 DCAF17Q5H9S7 520 aaPredicted RBP15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 PLA2G2CQ5R387 149 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 TCERG1LQ5VWI1 586 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 ARHGAP17Q68EM7 881 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 KLHDC10Q6PID8 442 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 CCDC186Q7Z3E2 898 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 TSTD1Q8NFU3 115 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 NDRG1Q92597 394 aaKnown RBP15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 SLC35C1Q96A29 364 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 TSG101Q99816 390 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 TPSD1Q9BZJ3 242 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 SMOC1Q9H4F8 434 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 MYOFQ9NZM1 2061 aa15.16■□□□□ 0.02
CDC42SE2-209ENST00000506419 TBC1D3BA6NDS4 549 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 KLKB1P03952 638 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 ZNF806P0C7X5 589 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 SDHBP21912 280 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 PLA2G4AP47712 749 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 LRMPQ12912 555 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 ANO4Q32M45 955 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 RAB41Q5JT25 222 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 C10orf120Q5SQS8 335 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 ANO7Q6IWH7 933 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 Q6ZNB5 142 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 PIGZQ86VD9 579 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 TTC30AQ86WT1 665 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 MIB1Q86YT6 1006 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 ZNF276Q8N554 614 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 UBR7Q8N806 425 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 ANKRD52Q8NB46 1076 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 MDGA1Q8NFP4 955 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 DHTKD1Q96HY7 919 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 RTKNQ9BST9 563 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 DEC1Q9P2X7 70 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 ARMCX3Q9UH62 379 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 DNMT3LQ9UJW3 386 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 NAGPAQ9UK23 515 aa15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 CDV3Q9UKY7 258 aaKnown RBP15.15■□□□□ 0.02
CDC42SE2-209ENST00000506419 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 SLC30A4O14863 429 aa15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 STC2O76061 302 aa15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 CISD3P0C7P0 127 aa15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 TRIM21P19474 475 aaKnown RBP15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 LRRC63Q05C16 580 aa15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 CUL2Q13617 745 aa15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 BTBD8Q5XKL5 378 aa15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 TPGS1Q6ZTW0 290 aa15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 TTC39CQ8N584 583 aa15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 FRMD1Q8N878 549 aa15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 OLIG1Q8TAK6 271 aa15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 CNOT6LQ96LI5 555 aaKnown RBP15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 CLIC5Q9NZA1 410 aa15.14■□□□□ 0.01
CDC42SE2-209ENST00000506419 LAMA1P25391 3075 aa15.13■□□□□ 0.01
CDC42SE2-209ENST00000506419 PRRT4C9JH25 899 aa15.13■□□□□ 0.01
CDC42SE2-209ENST00000506419 RNF225M0QZC1 329 aaPredicted RBP15.13■□□□□ 0.01
CDC42SE2-209ENST00000506419 TYRP14679 529 aa15.13■□□□□ 0.01
CDC42SE2-209ENST00000506419 BCKDHBP21953 392 aa15.13■□□□□ 0.01
CDC42SE2-209ENST00000506419 PSEN1P49768 467 aa15.13■□□□□ 0.01
CDC42SE2-209ENST00000506419 PDE4CQ08493 712 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms