RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 ADAMTSL2Q86TH1 951 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 DPP9Q86TI2 863 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 FBXO11Q86XK2 927 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CPNE9Q8IYJ1 553 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CHPFQ8IZ52 775 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ENGASEQ8NFI3 743 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ATXN2LQ8WWM7 1075 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 EXT2Q93063 718 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 KAZALD1Q96I82 304 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 PPP1R36Q96LQ0 422 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 DDX50Q9BQ39 737 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 AZI2Q9H6S1 392 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 INTS7Q9NVH2 962 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 SCOCQ9UIL1 159 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 NOD1Q9Y239 953 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 AP3M1Q9Y2T2 418 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 GMPPBQ9Y5P6 360 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 MAFBQ9Y5Q3 323 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 MYO3BQ8WXR4 1341 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CCDC195A0A1B0GUA6 201 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 USP17L15C9J2P7 530 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 USP17L13C9JLJ4 530 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 USP17L11C9JVI0 530 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 USP17L18D6R9N7 530 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 USP17L22D6RA61 530 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 USP17L17D6RBQ6 530 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 USP17L19D6RCP7 530 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 USP17L20D6RJB6 530 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 E9PMD0 336 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 INO80B-WBP1J3KQ70 363 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 FARP2O94887 1054 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 RECKO95980 971 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 POMCP01189 267 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ENO2P09104 434 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 TMEM191BP0C7N4 346 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 FCER1AP12319 257 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 PRKACAP17612 351 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 GSSP48637 474 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 MYL7Q01449 175 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 USP17L24Q0WX57 530 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 USP41Q3LFD5 358 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 PPP6R3Q5H9R7 873 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM205BPQ63HN1 556 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 KRT80Q6KB66 452 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 LRRC8BQ6P9F7 803 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 USP17L6PQ6QN14 398 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ZBTB33Q86T24 672 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 TXNRD3Q86VQ6 643 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 SNX32Q86XE0 403 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 TBC1D10CQ8IV04 446 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF280CQ8ND82 737 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 NEDD1Q8NHV4 660 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CDC26Q8NHZ8 85 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 EFHD2Q96C19 240 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CFAP36Q96G28 342 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF641Q96N77 438 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 KIFC1Q9BW19 673 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 KATNAL1Q9BW62 490 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 NDEL1Q9GZM8 345 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 FOXP1Q9H334 677 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 NARFLQ9H6Q4 476 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 SAYSD1Q9NPB0 183 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ABHD10Q9NUJ1 306 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 NMRK1Q9NWW6 199 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CDC14AQ9UNH5 594 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 SRPRBQ9Y5M8 271 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 SNX8Q9Y5X2 465 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ABCC12Q96J65 1359 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 KNL1Q8NG31 2342 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF609O15014 1411 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ARHGAP10A1A4S6 786 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CCDC78A2IDD5 438 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 UBE2Q2LH0YL09 131 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 TMX2-CTNND1H3BSU7 103 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 SH2B2O14492 632 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 GYG2O15488 501 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 BNIP3LO60238 219 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 AFPP02771 609 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 FYNP06241 537 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ACAA1P09110 424 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 WEE2P0C1S8 567 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 BRAFP15056 766 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 HPGDP15428 266 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF18P17022 549 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 FGFR4P22455 802 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ATP2B4P23634 1241 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 PHBP35232 272 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 IRS1P35568 1242 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 GCLMP48507 274 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 SCNN1GP51170 649 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 NEK3P51956 506 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 USP14P54578 494 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 NLRP11P59045 1033 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 FMR1Q06787 632 aaKnown RBP eCLIP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 RASGRF1Q13972 1273 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 HADHQ16836 314 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 EDRF1Q3B7T1 1238 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM47CQ5HY64 1035 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 NEK5Q6P3R8 708 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 SHC4Q6S5L8 630 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms