RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 NUP58Q9BVL2 599 aa13.37□□□□□ -0.27
LSM6-204ENST00000504181 RUSC1Q9BVN2 902 aa13.37□□□□□ -0.27
LSM6-204ENST00000504181 C6orf106Q9H6K1 298 aaPredicted RBP13.37□□□□□ -0.27
LSM6-204ENST00000504181 DDX19AQ9NUU7 478 aaKnown RBP13.37□□□□□ -0.27
LSM6-204ENST00000504181 DPP3Q9NY33 737 aa13.37□□□□□ -0.27
LSM6-204ENST00000504181 KIAA1024Q9UPX6 916 aa13.37□□□□□ -0.27
LSM6-204ENST00000504181 PCDHB1Q9Y5F3 818 aa13.37□□□□□ -0.27
LSM6-204ENST00000504181 SPTBN1Q01082 2364 aaKnown RBP13.37□□□□□ -0.27
LSM6-204ENST00000504181 NYNRINQ9P2P1 1898 aaKnown RBP13.36□□□□□ -0.27
LSM6-204ENST00000504181 ICE1Q9Y2F5 2266 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 A0A1B0GTQ1 180 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 GFRA2O00451 464 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 OGTO15294 1046 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 TRAK2O60296 914 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 OAS1P00973 400 aaKnown RBP13.36□□□□□ -0.27
LSM6-204ENST00000504181 ACADMP11310 421 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 CR2P20023 1033 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 MUTP22033 750 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 MYL7Q01449 175 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 KYAT1Q16773 422 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 HAUS3Q68CZ6 603 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 DENND5BQ6ZUT9 1274 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 CD302Q8IX05 232 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 PRCCQ92733 491 aaPredicted RBP13.36□□□□□ -0.27
LSM6-204ENST00000504181 TRIM9Q9C026 710 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 BRMS1Q9HCU9 246 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 L1RE1Q9UN81 338 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 SH3BP1Q9Y3L3 701 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 STON1Q9Y6Q2 735 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 DOCK9Q9BZ29 2069 aa13.36□□□□□ -0.27
LSM6-204ENST00000504181 NEDD8-MDP1E9PL57 170 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 E9PMD0 336 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 K7ENP7 123 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 AFPP02771 609 aaKnown RBP13.35□□□□□ -0.27
LSM6-204ENST00000504181 MPOP05164 745 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 ITGAVP06756 1048 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 ABCB4P21439 1286 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 LIG4P49917 911 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 INSM1Q01101 510 aaPredicted RBP13.35□□□□□ -0.27
LSM6-204ENST00000504181 RAD51AP2Q09MP3 1159 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 ORC1Q13415 861 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 INO80CQ6PI98 192 aaPredicted RBP13.35□□□□□ -0.27
LSM6-204ENST00000504181 OSTM1Q86WC4 334 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 TMPRSS6Q8IU80 811 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 DCBLD1Q8N8Z6 715 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 KCNB2Q92953 911 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 FUBP3Q96I24 572 aaKnown RBP eCLIP13.35□□□□□ -0.272e-7■■■□□ 16.1
LSM6-204ENST00000504181 SPATA17Q96L03 361 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 DPH1Q9BZG8 443 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 C17orf75Q9HAS0 396 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.35□□□□□ -0.27
LSM6-204ENST00000504181 DERAQ9Y315 318 aa13.35□□□□□ -0.27
LSM6-204ENST00000504181 LRBAP50851 2863 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 FBN2P35556 2912 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 COL27A1Q8IZC6 1860 aaPredicted RBP13.34□□□□□ -0.27
LSM6-204ENST00000504181 C2CD3Q4AC94 2353 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 SUV39H1O43463 412 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 DFNA5O60443 496 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 IGLV3-19P01714 112 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 IRF1P10914 325 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 MAGEA11P43364 429 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 CCR10P46092 362 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 SMTNP53814 917 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 C21orf59P57076 290 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 GABREP78334 506 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 IFRD2Q12894 506 aaPredicted RBP13.34□□□□□ -0.27
LSM6-204ENST00000504181 SERINC3Q13530 473 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 RINT1Q6NUQ1 792 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 WBP2Q969T9 261 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 ZNF274Q96GC6 653 aaPredicted RBP13.34□□□□□ -0.27
LSM6-204ENST00000504181 ZNF560Q96MR9 790 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 XPO6Q96QU8 1125 aaKnown RBP13.34□□□□□ -0.27
LSM6-204ENST00000504181 NTPCRQ9BSD7 190 aaKnown RBP13.34□□□□□ -0.27
LSM6-204ENST00000504181 MSTO1Q9BUK6 570 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 TTLL2Q9BWV7 592 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 OSGEPQ9NPF4 335 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 CPSF3Q9UKF6 684 aaKnown RBP13.34□□□□□ -0.27
LSM6-204ENST00000504181 CENPEQ02224 2701 aa13.34□□□□□ -0.27
LSM6-204ENST00000504181 HNRNPDLO14979 420 aaKnown RBP13.33□□□□□ -0.28
LSM6-204ENST00000504181 CACNG3O60359 315 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 HUS1O60921 280 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 ATP2C2O75185 946 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 TYRP14679 529 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 BDNFP23560 247 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 ANXA13P27216 316 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 ACSL1P33121 698 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 PPP3CCP48454 512 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 COPAP53621 1224 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 HIST2H2BCQ6DN03 193 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 TPGS1Q6ZTW0 290 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 CACTIN-AS1Q8N1I8 211 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 RFFLQ8WZ73 363 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 BIRC7Q96CA5 298 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 VCPIP1Q96JH7 1222 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 ELF4Q99607 663 aaPredicted RBP13.33□□□□□ -0.28
LSM6-204ENST00000504181 BBS2Q9BXC9 721 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 PCED1AQ9H1Q7 454 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 HSPBP1Q9NZL4 362 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 MAGEC2Q9UBF1 373 aaPredicted RBP13.33□□□□□ -0.28
LSM6-204ENST00000504181 LRWD1Q9UFC0 647 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms