RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 ANO7Q6IWH7 933 aa23.23■■□□□ 1.31
LSM6-203ENST00000503982 NUDT18Q6ZVK8 323 aa23.23■■□□□ 1.31
LSM6-203ENST00000503982 TADA2BQ86TJ2 420 aa23.23■■□□□ 1.31
LSM6-203ENST00000503982 TXNDC5Q8NBS9 432 aaKnown RBP23.23■■□□□ 1.31
LSM6-203ENST00000503982 ENGASEQ8NFI3 743 aa23.23■■□□□ 1.31
LSM6-203ENST00000503982 TATDN2Q93075 761 aa23.23■■□□□ 1.31
LSM6-203ENST00000503982 DUSP16Q9BY84 665 aa23.23■■□□□ 1.31
LSM6-203ENST00000503982 PNPLA8Q9NP80 782 aa23.23■■□□□ 1.31
LSM6-203ENST00000503982 SPHK2Q9NRA0 654 aa23.23■■□□□ 1.31
LSM6-203ENST00000503982 MMP17Q9ULZ9 603 aa23.23■■□□□ 1.31
LSM6-203ENST00000503982 THADAQ6YHU6 1953 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 ANTXRLA6NF34 631 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 HHLA1C9JL84 531 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 RHOBTB1O94844 696 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 RALAP11233 206 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 KCNA4P22459 653 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 GRIA2P42262 883 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 CCDC40Q4G0X9 1142 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 USP39Q53GS9 565 aaKnown RBP23.22■■□□□ 1.31
LSM6-203ENST00000503982 ALLCQ8N6M5 410 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 WBP2Q969T9 261 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 TIGD1Q96MW7 591 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 ARID3AQ99856 593 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 RTKNQ9BST9 563 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 KLF16Q9BXK1 252 aaPredicted RBP23.22■■□□□ 1.31
LSM6-203ENST00000503982 NMUR1Q9HB89 426 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 BCCIPQ9P287 314 aaKnown RBP eCLIP23.22■■□□□ 1.31
LSM6-203ENST00000503982 DEC1Q9P2X7 70 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 ARMCX3Q9UH62 379 aaPredicted RBP23.22■■□□□ 1.31
LSM6-203ENST00000503982 RASAL2Q9UJF2 1139 aa23.22■■□□□ 1.31
LSM6-203ENST00000503982 DCHS1Q96JQ0 3298 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 NEDD8-MDP1E9PL57 170 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 DCLK1O15075 740 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 EPN2O95208 641 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 PMS1P54277 932 aaKnown RBP23.21■■□□□ 1.31
LSM6-203ENST00000503982 YWHAEP62258 255 aaKnown RBP23.21■■□□□ 1.31
LSM6-203ENST00000503982 LRRC63Q05C16 580 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 LRMPQ12912 555 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 CBWD6Q4V339 395 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 COBLL1Q53SF7 1204 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 CBWD3Q5JTY5 395 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 CBWD5Q5RIA9 395 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 KLHL10Q6JEL2 608 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 TPGS1Q6ZTW0 290 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 TMEM25Q86YD3 366 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 MIB1Q86YT6 1006 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 SFTPA1Q8IWL2 248 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 ELOA2Q8IYF1 753 aaPredicted RBP23.21■■□□□ 1.31
LSM6-203ENST00000503982 PGBD3Q8N328 593 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 NETO1Q8TDF5 533 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 FAXDC2Q96IV6 333 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 LOXL4Q96JB6 756 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 XPO6Q96QU8 1125 aaKnown RBP23.21■■□□□ 1.31
LSM6-203ENST00000503982 POLMQ9NP87 494 aaPredicted RBP23.21■■□□□ 1.31
LSM6-203ENST00000503982 ZDHHC4Q9NPG8 344 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 CYLDQ9NQC7 956 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 OSER1Q9NX31 292 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 EBF1Q9UH73 591 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 DNMT3LQ9UJW3 386 aa23.21■■□□□ 1.31
LSM6-203ENST00000503982 MYO18AQ92614 2054 aaKnown RBP23.21■■□□□ 1.31
LSM6-203ENST00000503982 MED19A0JLT2 244 aaPredicted RBP23.2■■□□□ 1.3
LSM6-203ENST00000503982 DCDC2BA2VCK2 349 aa23.2■■□□□ 1.3
LSM6-203ENST00000503982 FOXD2O60548 495 aaPredicted RBP23.2■■□□□ 1.3
LSM6-203ENST00000503982 CD19P15391 556 aa23.2■■□□□ 1.3
LSM6-203ENST00000503982 TNFRSF4P43489 277 aa23.2■■□□□ 1.3
LSM6-203ENST00000503982 PSEN1P49768 467 aa23.2■■□□□ 1.3
LSM6-203ENST00000503982 KIF11P52732 1056 aa23.2■■□□□ 1.3
LSM6-203ENST00000503982 UBE2HP62256 183 aa23.2■■□□□ 1.3
LSM6-203ENST00000503982 PLK5Q496M5 336 aa23.2■■□□□ 1.3
LSM6-203ENST00000503982 EOGTQ5NDL2 527 aa23.2■■□□□ 1.3
LSM6-203ENST00000503982 EMC10Q5UCC4 262 aa23.2■■□□□ 1.3
LSM6-203ENST00000503982 SLC4A11Q8NBS3 891 aa23.2■■□□□ 1.3
LSM6-203ENST00000503982 BBS2Q9BXC9 721 aa23.2■■□□□ 1.3
LSM6-203ENST00000503982 HOXC11O43248 304 aaPredicted RBP23.19■■□□□ 1.3
LSM6-203ENST00000503982 GDF9O60383 454 aa23.19■■□□□ 1.3
LSM6-203ENST00000503982 TULP3O75386 442 aa23.19■■□□□ 1.3
LSM6-203ENST00000503982 HMBSP08397 361 aa23.19■■□□□ 1.3
LSM6-203ENST00000503982 PLA2G4AP47712 749 aa23.19■■□□□ 1.3
LSM6-203ENST00000503982 RAD23BP54727 409 aa23.19■■□□□ 1.3
LSM6-203ENST00000503982 CREB5Q02930 508 aa23.19■■□□□ 1.3
LSM6-203ENST00000503982 MESP2Q0VG99 397 aa23.19■■□□□ 1.3
LSM6-203ENST00000503982 SF3A2Q15428 464 aaKnown RBP23.19■■□□□ 1.3
LSM6-203ENST00000503982 CRY1Q16526 586 aa23.19■■□□□ 1.3
LSM6-203ENST00000503982 GOLGA7BQ2TAP0 167 aa23.19■■□□□ 1.3
LSM6-203ENST00000503982 C10orf76Q5T2E6 689 aa23.19■■□□□ 1.3
LSM6-203ENST00000503982 GRAMD4Q6IC98 578 aa23.19■■□□□ 1.3
LSM6-203ENST00000503982 HTR3DQ70Z44 454 aa23.19■■□□□ 1.3
LSM6-203ENST00000503982 RSRC2Q7L4I2 434 aaKnown RBP23.19■■□□□ 1.3
LSM6-203ENST00000503982 DNAJC17Q9NVM6 304 aaKnown RBP23.19■■□□□ 1.3
LSM6-203ENST00000503982 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.19■■□□□ 1.3
LSM6-203ENST00000503982 HESX1Q9UBX0 185 aa23.19■■□□□ 1.3
LSM6-203ENST00000503982 PPP1R2P41236 205 aa23.18■■□□□ 1.3
LSM6-203ENST00000503982 EFEMP1Q12805 493 aa23.18■■□□□ 1.3
LSM6-203ENST00000503982 CUL2Q13617 745 aa23.18■■□□□ 1.3
LSM6-203ENST00000503982 CCDC186Q7Z3E2 898 aa23.18■■□□□ 1.3
LSM6-203ENST00000503982 IL17RCQ8NAC3 791 aa23.18■■□□□ 1.3
LSM6-203ENST00000503982 BHMTQ93088 406 aa23.18■■□□□ 1.3
LSM6-203ENST00000503982 DHTKD1Q96HY7 919 aaPredicted RBP23.18■■□□□ 1.3
LSM6-203ENST00000503982 GBP4Q96PP9 640 aa23.18■■□□□ 1.3
LSM6-203ENST00000503982 CDK5RAP1Q96SZ6 601 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms