RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SPATA20Q8TB22 786 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 USP33Q8TEY7 942 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 DDX1Q92499 740 aaKnown RBP12.61□□□□□ -0.39
MED28-203ENST00000503945 ERCC4Q92889 916 aaPredicted RBP12.61□□□□□ -0.39
MED28-203ENST00000503945 TATDN2Q93075 761 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 JAKMIP2Q96AA8 810 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 UBXN6Q9BZV1 441 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 SMOC1Q9H4F8 434 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 METTL14Q9HCE5 456 aaKnown RBP12.61□□□□□ -0.39
MED28-203ENST00000503945 PNPLA8Q9NP80 782 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 CISHQ9NSE2 258 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 ARMCX3Q9UH62 379 aaPredicted RBP12.61□□□□□ -0.39
MED28-203ENST00000503945 EBF1Q9UH73 591 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 MYO16Q9Y6X6 1858 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 ABCA7Q8IZY2 2146 aa12.61□□□□□ -0.39
MED28-203ENST00000503945 ANAPC1Q9H1A4 1944 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 TBC1D3BA6NDS4 549 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 PSMA7O14818 248 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 SLC16A3O15427 465 aaKnown RBP12.6□□□□□ -0.39
MED28-203ENST00000503945 KAT7O95251 611 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 RALAP11233 206 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 ADH5P11766 374 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 RARGP13631 454 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 PPP1R2P41236 205 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 KIF11P52732 1056 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 USP39Q53GS9 565 aaKnown RBP12.6□□□□□ -0.39
MED28-203ENST00000503945 DCAF17Q5H9S7 520 aaPredicted RBP12.6□□□□□ -0.39
MED28-203ENST00000503945 PLA2G2CQ5R387 149 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 PPP1R26Q5T8A7 1209 aaPredicted RBP12.6□□□□□ -0.39
MED28-203ENST00000503945 STPG1Q5TH74 334 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 CCDC33Q8N5R6 958 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 NAT16Q8N8M0 369 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 C12orf50Q8NA57 414 aaPredicted RBP12.6□□□□□ -0.39
MED28-203ENST00000503945 TSTD1Q8NFU3 115 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 EZH1Q92800 747 aaPredicted RBP12.6□□□□□ -0.39
MED28-203ENST00000503945 HHIPQ96QV1 700 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 DUSP9Q99956 384 aaKnown RBP12.6□□□□□ -0.39
MED28-203ENST00000503945 KLF16Q9BXK1 252 aaPredicted RBP12.6□□□□□ -0.39
MED28-203ENST00000503945 CYLDQ9NQC7 956 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 ARHGEF4Q9NR80 690 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 SPHK2Q9NRA0 654 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 DEC1Q9P2X7 70 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 DNMT3LQ9UJW3 386 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 LSM7Q9UK45 103 aaKnown RBP12.6□□□□□ -0.39
MED28-203ENST00000503945 KIAA1257Q9ULG3 409 aa12.6□□□□□ -0.39
MED28-203ENST00000503945 HHLA1C9JL84 531 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 ALDH1A2O94788 518 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 RHOBTB1O94844 696 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 IRF1P10914 325 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 PMLP29590 882 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 PGFP49763 221 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 DGKEP52429 567 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 RAD23BP54727 409 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 YWHAEP62258 255 aaKnown RBP12.59□□□□□ -0.39
MED28-203ENST00000503945 CETN1Q12798 172 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 GAB4Q2WGN9 574 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 HSF5Q4G112 596 aaPredicted RBP12.59□□□□□ -0.39
MED28-203ENST00000503945 C10orf120Q5SQS8 335 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 KLHDC10Q6PID8 442 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 TMEM25Q86YD3 366 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 BBS7Q8IWZ6 715 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 ZNF276Q8N554 614 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 ANKRD52Q8NB46 1076 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 SLC4A11Q8NBS3 891 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 KCNV2Q8TDN2 545 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 ZC3H10Q96K80 434 aaKnown RBP12.59□□□□□ -0.39
MED28-203ENST00000503945 ZFRQ96KR1 1074 aaKnown RBP12.59□□□□□ -0.39
MED28-203ENST00000503945 CDK5RAP1Q96SZ6 601 aaKnown RBP12.59□□□□□ -0.39
MED28-203ENST00000503945 WDR35Q9P2L0 1181 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 NAGPAQ9UK23 515 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 COQ4Q9Y3A0 265 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 USP3Q9Y6I4 520 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 NUP205Q92621 2012 aa12.59□□□□□ -0.39
MED28-203ENST00000503945 THADAQ6YHU6 1953 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 A0A1W2PQH9 124 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 DCLK1O15075 740 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 ZBTB24O43167 697 aaPredicted RBP12.58□□□□□ -0.4
MED28-203ENST00000503945 CYP26A1O43174 497 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 TIE1P35590 1138 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 PMS1P54277 932 aaKnown RBP12.58□□□□□ -0.4
MED28-203ENST00000503945 COG7P83436 770 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 CRY1Q16526 586 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 PLK5Q496M5 336 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 CBWD6Q4V339 395 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 CBWD3Q5JTY5 395 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 EOGTQ5NDL2 527 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 CBWD5Q5RIA9 395 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 EMC10Q5UCC4 262 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 ARHGAP17Q68EM7 881 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 GPRIN1Q7Z2K8 1008 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 CCDC186Q7Z3E2 898 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 TTC30AQ86WT1 665 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 ARHGAP18Q8N392 663 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 CEP63Q96MT8 703 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 XPO6Q96QU8 1125 aaKnown RBP12.58□□□□□ -0.4
MED28-203ENST00000503945 DUSP15Q9H1R2 295 aaPredicted RBP12.58□□□□□ -0.4
MED28-203ENST00000503945 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.58□□□□□ -0.4
MED28-203ENST00000503945 CLIC5Q9NZA1 410 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 NUDT5Q9UKK9 219 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 ANGPTL2Q9UKU9 493 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms