RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 CHRNA5P30532 468 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 CASP2P42575 452 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 RASSF7Q02833 373 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 ACCSLQ4AC99 568 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 DCAF6Q58WW2 860 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 FAM133BQ5BKY9 247 aaKnown RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 ZFP1Q6P2D0 407 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 LRRC74BQ6ZQY2 392 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 ITIH5Q86UX2 942 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF354CQ86Y25 554 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 ZBED8Q8IZ13 594 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 CCDC33Q8N5R6 958 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 TMCO5AQ8N6Q1 288 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 GRK7Q8WTQ7 553 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 FAM136AQ96C01 138 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 KCNK16Q96T55 309 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 CORO1BQ9BR76 489 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 FRMD8Q9BZ67 464 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 TSPYL2Q9H2G4 693 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 GPCPD1Q9NPB8 672 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 AAASQ9NRG9 546 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 DDX43Q9NXZ2 648 aaKnown RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 TAB2Q9NYJ8 693 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 IGSF9Q9P2J2 1179 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 SERTAD1Q9UHV2 236 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 DMTF1Q9Y222 760 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 LZTS1Q9Y250 596 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 B3GALT1Q9Y5Z6 326 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 PDE2AO00408 941 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 CA12O43570 354 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 ADCY3O60266 1144 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 OPHN1O60890 802 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 PRKCGP05129 697 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 ESRRAP11474 423 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 BRAFP15056 766 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 CSNK1DP48730 415 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 CDK8P49336 464 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 TIMM10P62072 90 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 PDAP1Q13442 181 aaKnown RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 LONRF1Q17RB8 773 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 SPRED3Q2MJR0 410 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 WSCD2Q2TBF2 565 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 PUS10Q3MIT2 529 aaKnown RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 DUSP28Q4G0W2 176 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 SLC9C2Q5TAH2 1124 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 AFTPHQ6ULP2 937 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 OLFML1Q6UWY5 402 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 GDPD4Q6W3E5 623 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 PRR23BQ6ZRT6 265 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 NUP54Q7Z3B4 507 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 SETD3Q86TU7 594 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 C11orf74Q86VG3 221 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 AHI1Q8N157 1196 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 TRMT2BQ96GJ1 504 aaKnown RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 MAGEB18Q96M61 343 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 TCEANC2Q96MN5 208 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 BIRC8Q96P09 236 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 EFHD1Q9BUP0 239 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 NOC4LQ9BVI4 516 aaKnown RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 NACA2Q9H009 215 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 HIPK2Q9H2X6 1198 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 PLEKHA4Q9H4M7 779 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 TUBGCP4Q9UGJ1 667 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 ZBTB21Q9ULJ3 1066 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 TNFSF13BQ9Y275 285 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 ATG2BQ96BY7 2078 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 TET1Q8NFU7 2136 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 ARHGEF37A1IGU5 675 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 EME2A4GXA9 379 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 TMEM247A6NEH6 219 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 FAM47DPA6NHR8 397 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 SMAD6O43541 496 aaKnown RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 FYNP06241 537 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 M6PRP20645 277 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 PRPH2P23942 346 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 SCNN1GP51170 649 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 HPCAP84074 193 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 CETN1Q12798 172 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 PNOCQ13519 176 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 CTC1Q2NKJ3 1217 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 DEPDC1Q5TB30 811 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 LGSNQ5TDP6 509 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF280DQ6N043 979 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 NEPROQ6NW34 567 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 DBX2Q6ZNG2 339 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 Q6ZNX1 250 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 C4orf50Q6ZRC1 276 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 SV2AQ7L0J3 742 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 RAB3IL1Q8TBN0 382 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 FBXW7Q969H0 707 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 WDR34Q96EX3 536 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 PSD2Q9BQI7 771 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 TBC1D10AQ9BXI6 508 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 WWP1Q9H0M0 922 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 PORCNQ9H237 461 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 BOLA2Q9H3K6 86 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 STN1Q9H668 368 aaKnown RBP2.9□□□□□ -1.95
NEDD4-204ENST00000503468 B3GNT3Q9Y2A9 372 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 STK38LQ9Y2H1 464 aa2.9□□□□□ -1.95
NEDD4-204ENST00000503468 NAALAD2Q9Y3Q0 740 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms