RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ABLIM3O94929 683 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 IGLV3-25P01717 112 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 LTFP02788 710 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 GLI1P08151 1106 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 HAPLN1P10915 354 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 RALAP11233 206 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 KRT10P13645 584 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 MYOGP15173 224 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 ATP2A2P16615 1042 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 OR1D2P34982 312 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 NOS2P35228 1153 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 PTPN7P35236 360 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 GRIK1P39086 918 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 PAFAH1B1P43034 410 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 SSR1P43307 286 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 GLUD2P49448 558 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 SLC8A3P57103 927 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 SNX16P57768 344 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 DUSP4Q13115 394 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 EIF4EBP2Q13542 120 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 MTMR3Q13615 1198 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 ACAP1Q15027 740 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 CYP1B1Q16678 543 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 LONRF2Q1L5Z9 754 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 SLC25A52Q3SY17 297 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 DCAF6Q58WW2 860 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 ZC3H12AQ5D1E8 599 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 SPOUT1Q5T280 376 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 ARTNQ5T4W7 220 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 SEL1L2Q5TEA6 688 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 CCDC181Q5TID7 509 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 VSTM1Q6UX27 236 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 SPOCD1Q6ZMY3 1216 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 STRADAQ7RTN6 431 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 SCN4BQ8IWT1 228 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 FIBCD1Q8N539 461 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 CCDC185Q8N715 623 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 CMASQ8NFW8 434 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 ADAM32Q8TC27 787 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 FAM71BQ8TC56 605 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 IRGQQ8WZA9 623 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 ANKRD7Q92527 254 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 FAM149B1Q96BN6 582 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 TMEM169Q96HH4 297 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 RPGRIP1Q96KN7 1286 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 SLC9A7Q96T83 725 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 LRRC1Q9BTT6 524 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 SNRNP25Q9BV90 132 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 OXCT2Q9BYC2 517 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 DDX47Q9H0S4 455 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 ZBP1Q9H171 429 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 POPDC2Q9HBU9 364 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 WDR6Q9NNW5 1121 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 NGRNQ9NPE2 291 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 TMPRSS4Q9NRS4 437 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 PIGVQ9NUD9 493 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 MTMR10Q9NXD2 777 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 INSL6Q9Y581 213 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 LAMA2P24043 3122 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 DOCK4Q8N1I0 1966 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 DOCK6Q96HP0 2047 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 LRRD1A4D1F6 860 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 LINC01553A4QN01 128 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 ZSCAN5CA6NGD5 496 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 GRXCR1A8MXD5 290 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 TRIM66O15016 1216 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 MDM4O15151 490 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 RAD51CO43502 376 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 RNF8O76064 485 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 ZRANB2O95218 330 aaKnown RBP eCLIP7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 KRT7P08729 469 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 RHOXF2BP0C7M4 288 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 H2AFXP16104 143 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 KDELR1P24390 212 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 IL4RP24394 825 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 DNAJB1P25685 340 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 DNAJB2P25686 324 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 PPM1AP35813 382 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 PTGIRP43119 386 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 SULT1E1P49888 294 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 DPYSL3Q14195 570 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 BSPRYQ5W0U4 402 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 BEND5Q7L4P6 421 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 TAC4Q86UU9 113 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 KLHL7Q8IXQ5 586 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 RCOR2Q8IZ40 523 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 VPS52Q8N1B4 723 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 NUP93Q8N1F7 819 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 C12orf50Q8NA57 414 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 KLHL23Q8NBE8 558 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 PHOSPHO2Q8TCD6 241 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 SPPL2BQ8TCT7 592 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 C2orf15Q8WU43 125 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 TEKT4Q8WW24 435 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 ATG4AQ8WYN0 398 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 UBXN4Q92575 508 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 EDEM1Q92611 657 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 PGAP3Q96FM1 320 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 RBM41Q96IZ5 413 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 SPATA17Q96L03 361 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms