RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 HNRNPMP52272 730 aaKnown RBP eCLIP2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 KCNAB1Q14722 419 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 PWP2Q15269 919 aaKnown RBP2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 TXNRD1Q16881 649 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZNF750Q32MQ0 723 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 PTCHD3Q3KNS1 767 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 ICE2Q659A1 982 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 SFRP4Q6FHJ7 346 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 ERAP2Q6P179 960 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 PGBD2Q6P3X8 592 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 FBXO38Q6PIJ6 1188 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 KRT28Q7Z3Y7 464 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 AMIGO2Q86SJ2 522 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 SLC15A3Q8IY34 581 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 SPARTQ8N0X7 666 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZNF527Q8NB42 609 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 GLIS1Q8NBF1 620 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 SLC30A5Q8TAD4 765 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 DNAJB14Q8TBM8 379 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 TFAP2BQ92481 460 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 MUL1Q969V5 352 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 FAM136AQ96C01 138 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 C18orf8Q96DM3 657 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 TMEM41AQ96HV5 264 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 SNX27Q96L92 541 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 OSBPL9Q96SU4 736 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 GDF15Q99988 308 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 TTLL2Q9BWV7 592 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 EIF2AQ9BY44 585 aaKnown RBP2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 ACTRT3Q9BYD9 372 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 TPSD1Q9BZJ3 242 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 AMBRA1Q9C0C7 1298 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 DHX36Q9H2U1 1008 aaKnown RBP2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 EBF3Q9H4W6 596 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 PPCSQ9HAB8 311 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 GBA2Q9HCG7 927 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 DNMT3BQ9UBC3 853 aaKnown RBP2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 DKK4Q9UBT3 224 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 SERTAD3Q9UJW9 196 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 SLC39A10Q9ULF5 831 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 CAPN11Q9UMQ6 739 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 SSX2IPQ9Y2D8 614 aa2.89□□□□□ -1.95
HMGB1P35-201ENST00000503360 IGKV2D-30A0A075B6S6 120 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 AQP7P3A6NL99 342 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 LINC00473A8K010 186 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 TARM1B6A8C7 271 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 ERVV-2B6SEH9 535 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 PODXLO00592 558 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 FFAR2O15552 330 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 SRGAP2O75044 1071 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 CSF1RP07333 972 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 PDHA1P08559 390 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 IDEP14735 1019 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 PPP3CBP16298 524 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 GABRB3P28472 473 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 ADORA2AP29274 412 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 ATICP31939 592 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 ALDH9A1P49189 494 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 COPAP53621 1224 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 SP2Q02086 613 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 ICA1Q05084 483 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 ITIH3Q06033 890 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 DHX8Q14562 1220 aaKnown RBP2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 KRT72Q14CN4 511 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 PUM3Q15397 648 aaKnown RBP2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 ELF2Q15723 593 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 DEPDC1Q5TB30 811 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 ANO1Q5XXA6 986 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 CCDC174Q6PII3 467 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 CRTC1Q6UUV9 634 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 TSHZ1Q6ZSZ6 1077 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 USP49Q70CQ1 688 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 YTHDF3Q7Z739 585 aaKnown RBP2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 FAM109AQ8N4B1 249 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 B3GALNT2Q8NCR0 500 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 TOR1AIP2Q8NFQ8 470 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 CYP2W1Q8TAV3 490 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 PIGOQ8TEQ8 1089 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 TMEM171Q8WVE6 324 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 LPIN2Q92539 896 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 STK33Q9BYT3 514 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 FAM83DQ9H4H8 585 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 KLC4Q9NSK0 619 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 ELOVL5Q9NYP7 299 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 RGL1Q9NZL6 768 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 ZMYND8Q9ULU4 1186 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 HPSEQ9Y251 543 aa2.88□□□□□ -1.95
HMGB1P35-201ENST00000503360 CYP2D7A0A087X1C5 515 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 GOLGA6L3A6NEY3 463 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 CD3EAPO15446 510 aaKnown RBP2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 KCNQ3O43525 872 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 NBNO60934 754 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 COQ9O75208 318 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 SKAP2O75563 359 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 URI1O94763 535 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 RHOP08100 348 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 HGFP14210 728 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 PRKAR1BP31321 381 aa2.87□□□□□ -1.95
HMGB1P35-201ENST00000503360 CHKAP35790 457 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms