RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 RALGAPA1Q6GYQ0 2036 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 A0A0A0MRY4 1105 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.14■□□□□ 0.33
SCLT1-204ENST00000503215 PRR5-ARHGAP8B1AHC4 643 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 SGK1O00141 431 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 KLF8O95600 359 aaPredicted RBP17.14■□□□□ 0.33
SCLT1-204ENST00000503215 RARGP13631 454 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 KIR2DL1P43626 348 aaPredicted RBP17.14■□□□□ 0.33
SCLT1-204ENST00000503215 DGKEP52429 567 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 ARHGAP8P85298 464 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 PLK5Q496M5 336 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 TCERG1LQ5VWI1 586 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 IL17RCQ8NAC3 791 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 TXNDC5Q8NBS9 432 aaKnown RBP17.14■□□□□ 0.33
SCLT1-204ENST00000503215 CCDC150Q8NCX0 1101 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 TSTD1Q8NFU3 115 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 CCDC34Q96HJ3 373 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 TPSD1Q9BZJ3 242 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 SPHK2Q9NRA0 654 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.14■□□□□ 0.33
SCLT1-204ENST00000503215 EBF1Q9UH73 591 aa17.14■□□□□ 0.33
SCLT1-204ENST00000503215 CDV3Q9UKY7 258 aaKnown RBP17.14■□□□□ 0.33
SCLT1-204ENST00000503215 MYO18AQ92614 2054 aaKnown RBP17.13■□□□□ 0.33
SCLT1-204ENST00000503215 TULP2O00295 520 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 LRP3O75074 770 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 ADAM23O75077 832 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 GADD45BO75293 160 aaPredicted RBP17.13■□□□□ 0.33
SCLT1-204ENST00000503215 TULP3O75386 442 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 SMC2O95347 1197 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 APODP05090 189 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 BMP6P22004 513 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 ATP5C1P36542 298 aaKnown RBP17.13■□□□□ 0.33
SCLT1-204ENST00000503215 FKBP3Q00688 224 aaKnown RBP17.13■□□□□ 0.33
SCLT1-204ENST00000503215 GAD2Q05329 585 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 ANO4Q32M45 955 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 ANO7Q6IWH7 933 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 HTR3DQ70Z44 454 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 NDRG1Q92597 394 aaKnown RBP17.13■□□□□ 0.33
SCLT1-204ENST00000503215 SLC35C1Q96A29 364 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 TMEM176AQ96HP8 235 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 TIGD1Q96MW7 591 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 TSG101Q99816 390 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 DUSP15Q9H1R2 295 aaPredicted RBP17.13■□□□□ 0.33
SCLT1-204ENST00000503215 MMP17Q9ULZ9 603 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 COQ4Q9Y3A0 265 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 USP3Q9Y6I4 520 aa17.13■□□□□ 0.33
SCLT1-204ENST00000503215 HOXC11O43248 304 aaPredicted RBP17.12■□□□□ 0.33
SCLT1-204ENST00000503215 EPN2O95208 641 aa17.12■□□□□ 0.33
SCLT1-204ENST00000503215 EIF2DP41214 584 aaKnown RBP17.12■□□□□ 0.33
SCLT1-204ENST00000503215 GRIA2P42262 883 aa17.12■□□□□ 0.33
SCLT1-204ENST00000503215 MRPS21P82921 87 aaKnown RBP17.12■□□□□ 0.33
SCLT1-204ENST00000503215 LRMPQ12912 555 aa17.12■□□□□ 0.33
SCLT1-204ENST00000503215 CRY1Q16526 586 aa17.12■□□□□ 0.33
SCLT1-204ENST00000503215 C10orf120Q5SQS8 335 aa17.12■□□□□ 0.33
SCLT1-204ENST00000503215 TPGS1Q6ZTW0 290 aa17.12■□□□□ 0.33
SCLT1-204ENST00000503215 PIGZQ86VD9 579 aa17.12■□□□□ 0.33
SCLT1-204ENST00000503215 TTC30AQ86WT1 665 aa17.12■□□□□ 0.33
SCLT1-204ENST00000503215 MDGA1Q8NFP4 955 aa17.12■□□□□ 0.33
SCLT1-204ENST00000503215 OTUB2Q96DC9 234 aa17.12■□□□□ 0.33
SCLT1-204ENST00000503215 ZC3H10Q96K80 434 aaKnown RBP17.12■□□□□ 0.33
SCLT1-204ENST00000503215 DUSP9Q99956 384 aaKnown RBP17.12■□□□□ 0.33
SCLT1-204ENST00000503215 PNPLA8Q9NP80 782 aa17.12■□□□□ 0.33
SCLT1-204ENST00000503215 NAGPAQ9UK23 515 aa17.12■□□□□ 0.33
SCLT1-204ENST00000503215 SLC16A3O15427 465 aaKnown RBP17.11■□□□□ 0.33
SCLT1-204ENST00000503215 STX10O60499 249 aa17.11■□□□□ 0.33
SCLT1-204ENST00000503215 KLKB1P03952 638 aa17.11■□□□□ 0.33
SCLT1-204ENST00000503215 BCKDHBP21953 392 aa17.11■□□□□ 0.33
SCLT1-204ENST00000503215 CCDC186Q7Z3E2 898 aa17.11■□□□□ 0.33
SCLT1-204ENST00000503215 RASSF3Q86WH2 238 aa17.11■□□□□ 0.33
SCLT1-204ENST00000503215 MIB1Q86YT6 1006 aa17.11■□□□□ 0.33
SCLT1-204ENST00000503215 FRMD1Q8N878 549 aa17.11■□□□□ 0.33
SCLT1-204ENST00000503215 LOXL4Q96JB6 756 aa17.11■□□□□ 0.33
SCLT1-204ENST00000503215 ARMCX3Q9UH62 379 aaPredicted RBP17.11■□□□□ 0.33
SCLT1-204ENST00000503215 DNMT3LQ9UJW3 386 aa17.11■□□□□ 0.33
SCLT1-204ENST00000503215 TBC1D3BA6NDS4 549 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 PPP1R3GB7ZBB8 358 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 CALCAP01258 141 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 TRIM21P19474 475 aaKnown RBP17.1■□□□□ 0.33
SCLT1-204ENST00000503215 TNFRSF4P43489 277 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 LRRC63Q05C16 580 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 CUL2Q13617 745 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 PLA2G2CQ5R387 149 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 BTBD8Q5XKL5 378 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 ARHGAP17Q68EM7 881 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 TCEAL6Q6IPX3 200 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 KLHL10Q6JEL2 608 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 KLHDC10Q6PID8 442 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 Q6ZNB5 142 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 UBR7Q8N806 425 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 RLN3Q8WXF3 142 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 BHMTQ93088 406 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 TCEAL3Q969E4 200 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 ERLEC1Q96DZ1 483 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 FAXDC2Q96IV6 333 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 DEC1Q9P2X7 70 aa17.1■□□□□ 0.33
SCLT1-204ENST00000503215 NEDD8-MDP1E9PL57 170 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 BIN1O00499 593 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 SLC30A4O14863 429 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 STC2O76061 302 aa17.09■□□□□ 0.33
SCLT1-204ENST00000503215 HMBSP08397 361 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms