RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 COMMD8Q9NX08 183 aa11.35□□□□□ -0.59
SNCA-207ENST00000502987 MAPK8IP1Q9UQF2 711 aa11.35□□□□□ -0.59
SNCA-207ENST00000502987 TNFRSF10BO14763 440 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 IKBKBO14920 756 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 ZBTB24O43167 697 aaPredicted RBP11.34□□□□□ -0.59
SNCA-207ENST00000502987 TLR5O60602 858 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 OLFM2O95897 454 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 MYL1P05976 194 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 FAM200BP0CF97 657 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 CD58P19256 250 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 EIF2DP41214 584 aaKnown RBP11.34□□□□□ -0.59
SNCA-207ENST00000502987 TNFRSF4P43489 277 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 VAMP7P51809 220 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 LIMK1P53667 647 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 CLDN10P78369 228 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 KRT85P78386 507 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 GOLGA8FQ08AF8 430 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 GOLGA8DPQ0D2H9 430 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 GAB4Q2WGN9 574 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 ZACNQ401N2 412 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 PLA2G2CQ5R387 149 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 TCEAL6Q6IPX3 200 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 CYP2U1Q7Z449 544 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 UNC93AQ86WB7 457 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 C12orf40Q86WS4 652 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 SFTPA1Q8IWL2 248 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 BBS7Q8IWZ6 715 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 PIGKQ92643 395 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 TAF4BQ92750 862 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 TCEAL3Q969E4 200 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 OTUB2Q96DC9 234 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 SPACA7Q96KW9 195 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 SMOQ99835 787 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 EDEM2Q9BV94 578 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 KIAA1468Q9P260 1216 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 DEC1Q9P2X7 70 aa11.34□□□□□ -0.59
SNCA-207ENST00000502987 LSM7Q9UK45 103 aaKnown RBP11.34□□□□□ -0.59
SNCA-207ENST00000502987 CEP192Q8TEP8 1941 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 BCLAF3A2AJT9 711 aaKnown RBP11.33□□□□□ -0.6
SNCA-207ENST00000502987 SGK1O00141 431 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 KHNYNO15037 678 aaKnown RBP11.33□□□□□ -0.6
SNCA-207ENST00000502987 BEST1O76090 585 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 ACO1P21399 889 aaKnown RBP11.33□□□□□ -0.6
SNCA-207ENST00000502987 NR2F2P24468 414 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 RPL13P26373 211 aaKnown RBP11.33□□□□□ -0.6
SNCA-207ENST00000502987 ATP5C1P36542 298 aaKnown RBP11.33□□□□□ -0.6
SNCA-207ENST00000502987 GCLMP48507 274 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 MESP2Q0VG99 397 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 BYSLQ13895 437 aaKnown RBP11.33□□□□□ -0.6
SNCA-207ENST00000502987 SDE2Q6IQ49 451 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 LPCAT2Q7L5N7 544 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 TMEM25Q86YD3 366 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 FAM186BQ8IYM0 893 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 CRYBG2Q8N1P7 616 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 IL17RCQ8NAC3 791 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 MDGA1Q8NFP4 955 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 WHAMMQ8TF30 809 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 HMGB4Q8WW32 186 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 RLN3Q8WXF3 142 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 CYFIP2Q96F07 1278 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 CNOT6LQ96LI5 555 aaKnown RBP11.33□□□□□ -0.6
SNCA-207ENST00000502987 NT5C1AQ9BXI3 368 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 SPHK2Q9NRA0 654 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 HMGXB4Q9UGU5 601 aa11.33□□□□□ -0.6
SNCA-207ENST00000502987 CNOT1A5YKK6 2376 aaKnown RBP11.33□□□□□ -0.6
SNCA-207ENST00000502987 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 TCRBV21S2A2A0A5A6 115 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 C4orf47A7E2U8 309 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 TULP3O75386 442 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 TBX18O95935 607 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 ASS1P00966 412 aaKnown RBP11.32□□□□□ -0.6
SNCA-207ENST00000502987 TRIM49P0CI25 452 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 TRIM49CP0CI26 452 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 BCKDHBP21953 392 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 PSMC2P35998 433 aaKnown RBP11.32□□□□□ -0.6
SNCA-207ENST00000502987 WASP42768 502 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 TUBP50607 506 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 NDUFA8P51970 172 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 ADAM9Q13443 819 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 UAP1L1Q3KQV9 507 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 HSF5Q4G112 596 aaPredicted RBP11.32□□□□□ -0.6
SNCA-207ENST00000502987 ZNF394Q53GI3 561 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 C10orf76Q5T2E6 689 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 N4BP2L1Q5TBK1 243 aaPredicted RBP11.32□□□□□ -0.6
SNCA-207ENST00000502987 SNX30Q5VWJ9 437 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 DAB2IPQ5VWQ8 1189 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 PMS2CLQ68D20 193 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 GRAMD4Q6IC98 578 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 TPGS1Q6ZTW0 290 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 INTS8Q75QN2 995 aaKnown RBP11.32□□□□□ -0.6
SNCA-207ENST00000502987 ARMCX6Q7L4S7 300 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 TRMT11Q7Z4G4 463 aaKnown RBP11.32□□□□□ -0.6
SNCA-207ENST00000502987 RASSF3Q86WH2 238 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 TMEFF1Q8IYR6 380 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 ZNF513Q8N8E2 541 aaPredicted RBP11.32□□□□□ -0.6
SNCA-207ENST00000502987 ZMIZ2Q8NF64 920 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 WBP2Q969T9 261 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 CCDC34Q96HJ3 373 aa11.32□□□□□ -0.6
SNCA-207ENST00000502987 ZFRQ96KR1 1074 aaKnown RBP11.32□□□□□ -0.6
SNCA-207ENST00000502987 XPO6Q96QU8 1125 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms