RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-218	ENST00000502357	HECTD3	Q5T447	861 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	SV2B	Q7L1I2	683 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	HS2ST1	Q7LGA3	356 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	BRAP	Q7Z569	592 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	METTL3	Q86U44	580 aa	Known RBP	13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	B3GALNT2	Q8NCR0	500 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	PDZD8	Q8NEN9	1154 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	OR6B3	Q8NGW1	331 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	PLEKHO2	Q8TD55	490 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	FBXO32	Q969P5	355 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	ERLEC1	Q96DZ1	483 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	MMS19	Q96T76	1030 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	HELZ2	Q9BYK8	2649 aa	Known RBP	13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	PANK4	Q9NVE7	773 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	OSER1	Q9NX31	292 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	CACNA2D2	Q9NY47	1150 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	HSPBP1	Q9NZL4	362 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	USP36	Q9P275	1121 aa	Known RBP	13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	NFE2L3	Q9Y4A8	694 aa		13.43	□□□□□ -0.26
LMNA-218	ENST00000502357	CKAP5	Q14008	2032 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	KCNJ18	B7U540	433 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357		H3BQV1	296 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	RTN3	O95197	1032 aa	Predicted RBP	13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	TBX18	O95935	607 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	TNNC2	P02585	160 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	SLC5A3	P53794	718 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	MYL6	P60660	151 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	IFRD2	Q12894	506 aa	Predicted RBP	13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	SURF1	Q15526	300 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	PLEKHG6	Q3KR16	790 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	RRAGB	Q5VZM2	374 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357		Q6ZNB5	142 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	TMPRSS7	Q7RTY8	843 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	FAM35A	Q86V20	835 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	SYCP3	Q8IZU3	236 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	SMO	Q99835	787 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	SDCBP2	Q9H190	292 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	SNX25	Q9H3E2	840 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	CCDC86	Q9H6F5	360 aa	Known RBP	13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	CSNK1G1	Q9HCP0	422 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	SCUBE2	Q9NQ36	999 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	GMIP	Q9P107	970 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	RAX	Q9Y2V3	346 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	SLCO1B1	Q9Y6L6	691 aa		13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.42	□□□□□ -0.26
LMNA-218	ENST00000502357	GFRA2	O00451	464 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	ZNF883	P0CG24	379 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	C7	P10643	843 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	TYR	P14679	529 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	IDE	P14735	1019 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	ACO1	P21399	889 aa	Known RBP	13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	RDX	P35241	583 aa	Known RBP	13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	CDH8	P55286	799 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	NUMA1	Q14980	2115 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	PSMD6	Q15008	389 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	ANO4	Q32M45	955 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	WDR72	Q3MJ13	1102 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	LARP1B	Q659C4	914 aa	Known RBP	13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	GRAMD4	Q6IC98	578 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	MARCH9	Q86YJ5	346 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	FUK	Q8N0W3	1084 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	RASSF8	Q8NHQ8	419 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	ZNF507	Q8TCN5	953 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	CGRRF1	Q99675	332 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	MKRN2	Q9H000	416 aa	Known RBP	13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	VRTN	Q9H8Y1	702 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	ITM2C	Q9NQX7	267 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	DNAJC17	Q9NVM6	304 aa	Known RBP	13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	COMMD8	Q9NX08	183 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	PPP4R2	Q9NY27	417 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	CCDC39	Q9UFE4	941 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	SH3BP1	Q9Y3L3	701 aa		13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	GOLGA4	Q13439	2230 aa	Known RBP	13.41	□□□□□ -0.26
LMNA-218	ENST00000502357	MYH10	P35580	1976 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357		A8MXQ7	604 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	HHLA1	C9JL84	531 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	TULP1	O00294	542 aa	Predicted RBP	13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	IGLV3-19	P01714	112 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	CD6	P30203	668 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	CYP24A1	Q07973	514 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	EHHADH	Q08426	723 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	RABEP1	Q15276	862 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	E2F4	Q16254	413 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	SNRNP35	Q16560	246 aa	Known RBP	13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	FUT11	Q495W5	492 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	BTBD8	Q5XKL5	378 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	FAM173B	Q6P4H8	233 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	CHPF	Q8IZ52	775 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	NOC3L	Q8WTT2	800 aa	Known RBP	13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	ELMO3	Q96BJ8	720 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	CRELD1	Q96HD1	420 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	ZDHHC5	Q9C0B5	715 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	SMYD3	Q9H7B4	428 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	NMUR1	Q9HB89	426 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	CYLD	Q9NQC7	956 aa		13.4	□□□□□ -0.26
LMNA-218	ENST00000502357	AGPAT3	Q9NRZ7	376 aa		13.4	□□□□□ -0.26

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