RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 TWIST1Q15672 202 aa3.47□□□□□ -1.85
TRBVA-201ENST00000498804 MEX3CQ5U5Q3 659 aaKnown RBP3.47□□□□□ -1.85
TRBVA-201ENST00000498804 MANEALQ5VSG8 457 aa3.47□□□□□ -1.85
TRBVA-201ENST00000498804 GRHL2Q6ISB3 625 aa3.47□□□□□ -1.85
TRBVA-201ENST00000498804 PTCHD4Q6ZW05 846 aa3.47□□□□□ -1.85
TRBVA-201ENST00000498804 BHLHA9Q7RTU4 235 aa3.47□□□□□ -1.85
TRBVA-201ENST00000498804 DGKHQ86XP1 1220 aa3.47□□□□□ -1.85
TRBVA-201ENST00000498804 LIX1LQ8IVB5 337 aa3.47□□□□□ -1.85
TRBVA-201ENST00000498804 PNISRQ8TF01 805 aaKnown RBP3.47□□□□□ -1.85
TRBVA-201ENST00000498804 ZNF668Q96K58 619 aaPredicted RBP3.47□□□□□ -1.85
TRBVA-201ENST00000498804 SNX22Q96L94 193 aa3.47□□□□□ -1.85
TRBVA-201ENST00000498804 SPRTNQ9H040 489 aaPredicted RBP3.47□□□□□ -1.85
TRBVA-201ENST00000498804 ZNF287Q9HBT7 754 aa3.47□□□□□ -1.85
TRBVA-201ENST00000498804 ELOVL5Q9NYP7 299 aa3.47□□□□□ -1.85
TRBVA-201ENST00000498804 RGS17Q9UGC6 210 aaPredicted RBP3.47□□□□□ -1.85
TRBVA-201ENST00000498804 ITGB1BP2Q9UKP3 347 aa3.47□□□□□ -1.85
TRBVA-201ENST00000498804 CA12O43570 354 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 RGS10O43665 173 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 TMPRSS11DO60235 418 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 PRAMEF2O60811 474 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 INMTO95050 263 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 MT-CO3P00414 261 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 FGBP02675 491 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 MBPP02686 304 aaPredicted RBP3.46□□□□□ -1.86
TRBVA-201ENST00000498804 TMEM191BP0C7N4 346 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 CD19P15391 556 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 TSHRP16473 764 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 ATP5F1P24539 256 aaPredicted RBP3.46□□□□□ -1.86
TRBVA-201ENST00000498804 SLC29A2Q14542 456 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 Q4G0T1 1027 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 ANO7Q6IWH7 933 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 KRT78Q8N1N4 520 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 MAFAQ8NHW3 353 aaPredicted RBP3.46□□□□□ -1.86
TRBVA-201ENST00000498804 PHKBQ93100 1093 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 ZBTB9Q96C00 473 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 EDC3Q96F86 508 aaKnown RBP3.46□□□□□ -1.86
TRBVA-201ENST00000498804 EFHD1Q9BUP0 239 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 BTBD1Q9H0C5 482 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 DHX36Q9H2U1 1008 aaKnown RBP3.46□□□□□ -1.86
TRBVA-201ENST00000498804 TBC1D23Q9NUY8 699 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 GAR1Q9NY12 217 aaKnown RBP3.46□□□□□ -1.86
TRBVA-201ENST00000498804 SCAF8Q9UPN6 1271 aaKnown RBP3.46□□□□□ -1.86
TRBVA-201ENST00000498804 FAM50BQ9Y247 325 aa3.46□□□□□ -1.86
TRBVA-201ENST00000498804 MYMKA6NI61 221 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 SOCS2O14508 198 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 ADAM10O14672 748 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 APAF1O14727 1248 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 MGEA5O60502 916 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 CBFA2T3O75081 653 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 ARP10275 920 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 YY1P25490 414 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 NR4A2P43354 598 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 CASP5P51878 434 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 COPB1P53618 953 aaKnown RBP3.45□□□□□ -1.86
TRBVA-201ENST00000498804 COPAP53621 1224 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 POLGP54098 1239 aaPredicted RBP3.45□□□□□ -1.86
TRBVA-201ENST00000498804 GHRHRQ02643 423 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 ZNF543Q08ER8 600 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 MTAPQ13126 283 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 TMEM65Q6PI78 240 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 VSTM1Q6UX27 236 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 ZNF398Q8TD17 642 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 MLXIPLQ9NP71 852 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 PRDM11Q9NQV5 511 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 TRNAU1APQ9NX07 287 aaKnown RBP3.45□□□□□ -1.86
TRBVA-201ENST00000498804 CAPN11Q9UMQ6 739 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 HPSEQ9Y251 543 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 SLC27A6Q9Y2P4 619 aa3.45□□□□□ -1.86
TRBVA-201ENST00000498804 AQP7P3A6NL99 342 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 C16orf96A6NNT2 1141 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 H3BNC9 293 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 FCHO1O14526 889 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 PPM1GO15355 546 aaPredicted RBP3.44□□□□□ -1.86
TRBVA-201ENST00000498804 PQBP1O60828 265 aaKnown RBP3.44□□□□□ -1.86
TRBVA-201ENST00000498804 CREB1P16220 341 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 HOXB6P17509 224 aaKnown RBP3.44□□□□□ -1.86
TRBVA-201ENST00000498804 TPH1P17752 444 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 HOXD9P28356 352 aaPredicted RBP3.44□□□□□ -1.86
TRBVA-201ENST00000498804 PRIM2P49643 509 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 GATMP50440 423 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 SLC14A1Q13336 389 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 DAG1Q14118 895 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 LARS2Q15031 903 aaKnown RBP3.44□□□□□ -1.86
TRBVA-201ENST00000498804 RABEP1Q15276 862 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 CLEC9AQ6UXN8 241 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 NANOGP1Q8N7R0 232 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 C16orf52Q8NHV5 167 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.44□□□□□ -1.86
TRBVA-201ENST00000498804 OSR1Q8TAX0 266 aaPredicted RBP3.44□□□□□ -1.86
TRBVA-201ENST00000498804 IPCEF1Q8WWN9 437 aaPredicted RBP3.44□□□□□ -1.86
TRBVA-201ENST00000498804 COQ8BQ96D53 544 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 BRIP1Q9BX63 1249 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 FAM83DQ9H4H8 585 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 SAP30LQ9HAJ7 183 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 CHPF2Q9P2E5 772 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 MGAT4CQ9UBM8 478 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 NKX1-2Q9UD57 310 aaPredicted RBP3.44□□□□□ -1.86
TRBVA-201ENST00000498804 ZNF212Q9UDV6 495 aa3.44□□□□□ -1.86
TRBVA-201ENST00000498804 GOLGA6CA6NDK9 693 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms