RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 IQCF3P0C7M6 154 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 DHRS4L1P0CG22 281 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 POLR2BP30876 1174 aaKnown RBP17.06■□□□□ 0.32
COL6A1-206ENST00000498614 IGBP1P78318 339 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 AP1B1Q10567 949 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 KRT72Q14CN4 511 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 WDR78Q5VTH9 848 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 FOXB2Q5VYV0 432 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 RFX8Q6ZV50 586 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 PLPPR4Q7Z2D5 763 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 KBTBD2Q8IY47 623 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 ALKBH8Q96BT7 664 aaKnown RBP17.06■□□□□ 0.32
COL6A1-206ENST00000498614 TWNKQ96RR1 684 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 SMYD3Q9H7B4 428 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 ARHGEF4Q9NR80 690 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 STX18Q9P2W9 335 aaKnown RBP17.06■□□□□ 0.32
COL6A1-206ENST00000498614 PCSK1NQ9UHG2 260 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 WASF2Q9Y6W5 498 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 E7ESA3 106 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 FCHO1O14526 889 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 NDC80O14777 642 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 CST8O60676 142 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 OSBPP22059 807 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 ETV4P43268 484 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 CPA2P48052 419 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 NEK3P51956 506 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 MBTD1Q05BQ5 628 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 THOC5Q13769 683 aaKnown RBP17.06■□□□□ 0.32
COL6A1-206ENST00000498614 POLNQ7Z5Q5 900 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 IGDCC3Q8IVU1 814 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 C1orf127Q8N9H9 656 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 STMN2Q93045 179 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 SCOCQ9UIL1 159 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 GPR25O00155 361 aa17.05■□□□□ 0.32
COL6A1-206ENST00000498614 ERBB2P04626 1255 aa17.05■□□□□ 0.32
COL6A1-206ENST00000498614 ITGB3P05106 788 aa17.05■□□□□ 0.32
COL6A1-206ENST00000498614 RARBP10826 455 aa17.05■□□□□ 0.32
COL6A1-206ENST00000498614 MYL2P10916 166 aa17.05■□□□□ 0.32
COL6A1-206ENST00000498614 AMPD1P23109 780 aa17.05■□□□□ 0.32
COL6A1-206ENST00000498614 RBBP5Q15291 538 aaKnown RBP17.05■□□□□ 0.32
COL6A1-206ENST00000498614 CCDC62Q6P9F0 684 aa17.05■□□□□ 0.32
COL6A1-206ENST00000498614 ALYREFQ86V81 257 aaKnown RBP17.05■□□□□ 0.32
COL6A1-206ENST00000498614 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.05■□□□□ 0.32
COL6A1-206ENST00000498614 PDCD7Q8N8D1 485 aaKnown RBP17.05■□□□□ 0.32
COL6A1-206ENST00000498614 PPP1R12CQ9BZL4 782 aa17.05■□□□□ 0.32
COL6A1-206ENST00000498614 KRT82Q9NSB4 513 aa17.05■□□□□ 0.32
COL6A1-206ENST00000498614 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.05■□□□□ 0.322e-10■■■□□ 14.7
COL6A1-206ENST00000498614 CHMP2BQ9UQN3 213 aa17.05■□□□□ 0.32
COL6A1-206ENST00000498614 FAM237BA0A1B0GVD1 139 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 E5RJQ4 531 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 MED7O43513 233 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 TGDSO95455 350 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 PGM1P36871 562 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 RAB27AP51159 221 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 ROR2Q01974 943 aaKnown RBP17.04■□□□□ 0.32
COL6A1-206ENST00000498614 FAAP100Q0VG06 881 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 TAF5Q15542 800 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 DPH6Q7L8W6 267 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 CHSY1Q86X52 802 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 XYLT1Q86Y38 959 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 GALNT15Q8N3T1 639 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 OXNAD1Q96HP4 312 aaPredicted RBP17.04■□□□□ 0.32
COL6A1-206ENST00000498614 MPHOSPH6Q99547 160 aaKnown RBP17.04■□□□□ 0.32
COL6A1-206ENST00000498614 NMUR2Q9GZQ4 415 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 LHX5Q9H2C1 402 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 PDGFCQ9NRA1 345 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 WDR35Q9P2L0 1181 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 XPO7Q9UIA9 1087 aaKnown RBP17.04■□□□□ 0.32
COL6A1-206ENST00000498614 TLL2Q9Y6L7 1015 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 LACTBL1A8MY62 500 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 PYGBP11216 843 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 KDELR1P24390 212 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 CACNA2D1P54289 1103 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 PTK7Q13308 1070 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 HADHQ16836 314 aaKnown RBP17.04■□□□□ 0.32
COL6A1-206ENST00000498614 JADE1Q6IE81 842 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 MFN1Q8IWA4 741 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 EXOC8Q8IYI6 725 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 SLC4A11Q8NBS3 891 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 FBXO27Q8NI29 283 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 APOPT1Q96IL0 206 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 BCO2Q9BYV7 579 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 PHACTR1Q9C0D0 580 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 ELOVL4Q9GZR5 314 aa17.04■□□□□ 0.32
COL6A1-206ENST00000498614 MMADHCQ9H3L0 296 aaPredicted RBP17.04■□□□□ 0.32
COL6A1-206ENST00000498614 TMEM88BA6NKF7 163 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 MAP3K7O43318 606 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 KRT7P08729 469 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 TXNP10599 105 aaKnown RBP17.03■□□□□ 0.32
COL6A1-206ENST00000498614 NRLP54845 237 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 HTRA3P83110 453 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 SH2D5Q6ZV89 423 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 UNC45BQ8IWX7 931 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 RSAD2Q8WXG1 361 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 HSPH1Q92598 858 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 MMP19Q99542 508 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 RNPEPQ9H4A4 650 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 TNFSF13BQ9Y275 285 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.03■□□□□ 0.32
COL6A1-206ENST00000498614 IL18RAPO95256 599 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms